RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SYF2O95926 243 aaKnown RBP26.1■■□□□ 1.77
SMAD4-213ENST00000591914 DCDP81605 110 aaKnown RBP26.1■■□□□ 1.77
SMAD4-213ENST00000591914 NFATC3Q12968 1075 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 HECTD2Q5U5R9 776 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 RNF44Q7L0R7 432 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 LRRC56Q8IYG6 542 aaPredicted RBP26.1■■□□□ 1.77
SMAD4-213ENST00000591914 GPATCH11Q8N954 259 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 PPFIBP2Q8ND30 876 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 ADAMTS17Q8TE56 1095 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 ANKMY1Q9P2S6 941 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 ADAMTS6Q9UKP5 1117 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 MAN2B2Q9Y2E5 1009 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 PSAT1Q9Y617 370 aa26.1■■□□□ 1.77
SMAD4-213ENST00000591914 FITM1A5D6W6 292 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 TSPAN12O95859 305 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 C8GP07360 202 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 FDXRP22570 491 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 IMPA1P29218 277 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 PMS2P54278 862 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 ARSFP54793 590 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 PRDX1Q06830 199 aaKnown RBP26.09■■□□□ 1.77
SMAD4-213ENST00000591914 SP140Q13342 867 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 FAM69BQ5VUD6 431 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 ICE2Q659A1 982 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 FAM45BPQ6NSW5 357 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 ZNF605Q86T29 641 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 MYO1HQ8N1T3 1032 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 FAM45AQ8TCE6 357 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 LINGO1Q96FE5 620 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 MRPS30Q9NP92 439 aaKnown RBP26.09■■□□□ 1.77
SMAD4-213ENST00000591914 TAC3Q9UHF0 121 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 VWA7Q9Y334 891 aa26.09■■□□□ 1.77
SMAD4-213ENST00000591914 UTP11Q9Y3A2 253 aaKnown RBP26.09■■□□□ 1.77
SMAD4-213ENST00000591914 IGKV1-8A0A0C4DH67 115 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 EIF3HO15372 352 aaKnown RBP eCLIP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 PDAP1Q13442 181 aaKnown RBP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 TSTA3Q13630 321 aaPredicted RBP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 GRM7Q14831 915 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 NKAIN1Q4KMZ8 207 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 YOD1Q5VVQ6 348 aaPredicted RBP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 FRMPD2BQ6IN97 320 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 SLC26A11Q86WA9 606 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 APLFQ8IW19 511 aaPredicted RBP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 MCOLN3Q8TDD5 553 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 C16orf45Q96MC5 204 aaPredicted RBP26.08■■□□□ 1.77
SMAD4-213ENST00000591914 OLFM1Q99784 485 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 PLCD4Q9BRC7 762 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 PARVBQ9HBI1 364 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 PDE10AQ9Y233 779 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 PADI2Q9Y2J8 665 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 SPTA1P02549 2419 aa26.08■■□□□ 1.77
SMAD4-213ENST00000591914 A0A1B0GX78 115 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 SLC16A5O15375 505 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 KLF7O75840 302 aaPredicted RBP26.07■■□□□ 1.76
SMAD4-213ENST00000591914 CCNDBP1O95273 360 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 VSX2P58304 361 aaPredicted RBP26.07■■□□□ 1.76
SMAD4-213ENST00000591914 IL2P60568 153 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 ZNF425Q6IV72 752 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 FBXO42Q6P3S6 717 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 TTLL10Q6ZVT0 673 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 ZC3HC1Q86WB0 502 aaKnown RBP26.07■■□□□ 1.76
SMAD4-213ENST00000591914 PAQR7Q86WK9 346 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 PYROXD1Q8WU10 500 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 CCDC138Q96M89 665 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 ZFYVE21Q9BQ24 234 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 RAB17Q9H0T7 212 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 SAYSD1Q9NPB0 183 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 CUTCQ9NTM9 273 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 IFT80Q9P2H3 777 aaPredicted RBP26.07■■□□□ 1.76
SMAD4-213ENST00000591914 CDC23Q9UJX2 597 aa26.07■■□□□ 1.76
SMAD4-213ENST00000591914 LOC105369274A0A096LPK9 316 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 LOC102723532A0A0G2JNH3 316 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 A0A0J9YVX5 310 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 ITGAXP20702 1163 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 PGGT1BP53609 377 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 ABATP80404 500 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 CKAP4Q07065 602 aaKnown RBP26.06■■□□□ 1.76
SMAD4-213ENST00000591914 WASHC2DQ5SRD0 308 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 STRA8Q7Z7C7 330 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 PALM2Q8IXS6 379 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 OR4N4Q8N0Y3 316 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 C9orf43Q8TAL5 461 aaPredicted RBP26.06■■□□□ 1.76
SMAD4-213ENST00000591914 ABHD17AQ96GS6 310 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 MCMBPQ9BTE3 642 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 SLC22A11Q9NSA0 550 aa26.06■■□□□ 1.76
SMAD4-213ENST00000591914 STOX2Q9P2F5 926 aaPredicted RBP26.06■■□□□ 1.76
SMAD4-213ENST00000591914 DSCR3O14972 297 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 RFPL1O75677 317 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 ONECUT2O95948 504 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 CD63P08962 238 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 ALAS2P22557 587 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 CAV1Q03135 178 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 MLIPQ5VWP3 458 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 MRPL14Q6P1L8 145 aaKnown RBP26.05■■□□□ 1.76
SMAD4-213ENST00000591914 TTC29Q8NA56 475 aaPredicted RBP26.05■■□□□ 1.76
SMAD4-213ENST00000591914 PHACTR1Q9C0D0 580 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 NSMCE4AQ9NXX6 385 aa26.05■■□□□ 1.76
SMAD4-213ENST00000591914 GPN3Q9UHW5 284 aaPredicted RBP26.05■■□□□ 1.76
SMAD4-213ENST00000591914 GCN1Q92616 2671 aaKnown RBP26.05■■□□□ 1.76
SMAD4-213ENST00000591914 HEATR5BQ9P2D3 2071 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms