RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 FAM136AQ96C01 138 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CRB3Q9BUF7 120 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 AGPAT4Q9NRZ5 378 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 SOX13Q9UN79 622 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 CRYL1Q9Y2S2 319 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 PCDHGA10Q9Y5H3 936 aa17.15■□□□□ 0.34
PRKCSH-211ENST00000590098 A1L4Q6 167 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ANKUB1A6NFN9 424 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 VSTM2BA6NLU5 285 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 NIPSNAP2O75323 286 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 MATN4O95460 622 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ARNTP27540 789 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 TERF1P54274 439 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 HIF1AQ16665 826 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 TYSND1Q2T9J0 566 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ANKRD20A4Q4UJ75 823 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 LURAP1LQ8IV03 231 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 PARP9Q8IXQ6 854 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 OR9A1PQ8NGU1 263 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 PPP4R1Q8TF05 950 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 COG1Q8WTW3 980 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ZFYVE21Q9BQ24 234 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ACAT2Q9BWD1 397 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 LHPPQ9H008 270 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 FAM114A2Q9NRY5 505 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF282Q9UDV7 671 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
PRKCSH-211ENST00000590098 ITPR2Q14571 2701 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 LOC105369274A0A096LPK9 316 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 A0A1W2PPV9 198 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 E5RI56 91 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CEP104O60308 925 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CCDC175P0C221 793 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 RPA3P35244 121 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 FASTKQ14296 549 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 MUM1Q2TAK8 710 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CRB2Q5IJ48 1285 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CRYBG3Q68DQ2 2970 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 RNF44Q7L0R7 432 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 OR4N4Q8N0Y3 316 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 DTWD1Q8N5C7 304 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 OR11G2Q8NGC1 345 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 DNAJB14Q8TBM8 379 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 STT3BQ8TCJ2 826 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 SMPDL3AQ92484 453 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 THOC3Q96J01 351 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CABS1Q96KC9 395 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 EPS8L2Q9H6S3 715 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 CDC14AQ9UNH5 594 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 SLC5A6Q9Y289 635 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 VPS9D1Q9Y2B5 631 aa17.13■□□□□ 0.33
PRKCSH-211ENST00000590098 TCRBV7S3A2A0A539 114 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 OR2A25A4D2G3 310 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 NRP2O60462 931 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 PHF2O75151 1096 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 VPS26AO75436 327 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 CATP04040 527 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ZGLP1P0C6A0 271 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 OGNP20774 298 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 FBLP22087 321 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 KLC1Q07866 573 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 GBX1Q14549 363 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 TRIP13Q15645 432 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ACSBG2Q5FVE4 666 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ARMC3Q5W041 872 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 KIAA0930Q6ICG6 404 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 NEPROQ6NW34 567 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 FBXO42Q6P3S6 717 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 IGFL2Q6UWQ7 119 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF662Q6ZS27 426 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 PRSS58Q8IYP2 241 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 TRIM58Q8NG06 486 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 C5orf34Q96MH7 638 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 MRPS30Q9NP92 439 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 UTP6Q9NYH9 597 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 SAMD15Q9P1V8 674 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ERRFI1Q9UJM3 462 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 NTNG1Q9Y2I2 539 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 SVILO95425 2214 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 POLEQ07864 2286 aa17.12■□□□□ 0.33
PRKCSH-211ENST00000590098 ZNF839A8K0R7 811 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 ARHGEF33A8MVX0 844 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 H0YGG7 62 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 MAP2K7O14733 419 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 AVILO75366 819 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 MED26O95402 600 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 HPP00738 406 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 PKMP14618 531 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 ACPPP15309 386 aa17.11■□□□□ 0.33
PRKCSH-211ENST00000590098 CXCR5P32302 372 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms