RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 POP7O75817 140 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 BMP10O95393 424 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 FDXRP22570 491 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 CA4P22748 312 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 AMPD1P23109 780 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 PTGER1P34995 402 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ST13P50502 369 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 EIF3EP60228 445 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 DCAF7P61962 342 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 KLC1Q07866 573 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 NIPAL4Q0D2K0 466 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 AP1B1Q10567 949 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 TMEM115Q12893 351 aaPredicted RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 PRKAA1Q13131 559 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 MMRN1Q13201 1228 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 KEAP1Q14145 624 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 PAFAH1B3Q15102 231 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 SLC5A12Q1EHB4 618 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ATP13A5Q4VNC0 1218 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 Q5PR19 223 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 MARC1Q5VT66 337 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 SHEQ5VZ18 495 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 PDPK2PQ6A1A2 396 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 SLC9A4Q6AI14 798 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 TXNRD3NBQ6F5E7 133 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 HMBOX1Q6NT76 420 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 DARS2Q6PI48 645 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 NEK10Q6ZWH5 1172 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 MAATS1Q7Z4T9 603 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ULK2Q8IYT8 1036 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ADGRF3Q8IZF5 1079 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 CLYBLQ8N0X4 340 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 VWA5B2Q8N398 1253 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS25-204ENST00000589577 LILRA3Q8N6C8 439 aaPredicted RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 TEX26Q8N6G2 289 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ARMC2Q8NEN0 867 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 GOT1L1Q8NHS2 421 aaPredicted RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 FLVCR1-AS1Q8TAF5 88 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 SUN3Q8TAQ9 357 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ARRDC2Q8TBH0 407 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 FAM57AQ8TBR7 257 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 FAM71BQ8TC56 605 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 CCHCR1Q8TD31 782 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 NAT14Q8WUY8 206 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 TFB1MQ8WVM0 346 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 MAGOHBQ96A72 148 aaKnown RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 FAF2Q96CS3 445 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 SCMH1Q96GD3 660 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 PPP1R2P1Q96PQ5 205 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 VPS35Q96QK1 796 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 VAT1Q99536 393 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 CRB3Q9BUF7 120 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 SRMSQ9H3Y6 488 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 NEUROD4Q9HD90 331 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 NT5MQ9NPB1 228 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 KLHL1Q9NR64 748 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 TTC7AQ9ULT0 858 aaPredicted RBP5.8□□□□□ -1.48
VPS25-204ENST00000589577 EDARQ9UNE0 448 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 ZNF148Q9UQR1 794 aa5.8□□□□□ -1.48
VPS25-204ENST00000589577 MGAM2Q2M2H8 2515 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.79□□□□□ -1.486e-7■■■□□ 15.5
VPS25-204ENST00000589577 ARHGAP21Q5T5U3 1957 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 IGHV1-45A0A0A0MS14 117 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 NSG1A0A0A6YYJ2 146 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 A0A1W2PPR1 153 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 OR2AG2A6NM03 316 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 MAP2K7O14733 419 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 MFSD11O43934 449 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 KCNJ13O60928 360 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 MED26O95402 600 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 MT-CYBP00156 380 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 IFNB1P01574 187 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 MMP2P08253 660 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 CD48P09326 243 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PIRTP0C851 137 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 RBP3P10745 1247 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 ALAS2P22557 587 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PBLDP30039 288 aaPredicted RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 STIP1P31948 543 aaKnown RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 NSG1P42857 185 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 FNTAP49354 379 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 EFNA3P52797 238 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 NUP107P57740 925 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 RPL26P61254 145 aaKnown RBP5.79□□□□□ -1.48
VPS25-204ENST00000589577 ZNF33BQ06732 778 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 CBLBQ13191 982 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PRPSAP1Q14558 356 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 PCBP2Q15366 365 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS25-204ENST00000589577 PPP1R7Q15435 360 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 CCNG2Q16589 344 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 P3H1Q32P28 736 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 EMC4Q5J8M3 183 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 NCBP2-AS2Q69YL0 99 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 ITPRIPL1Q6GPH6 555 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 TLDC1Q6P9B6 456 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 SPESP1Q6UW49 350 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 ARSKQ6UWY0 536 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 C4orf22Q6V702 233 aa5.79□□□□□ -1.48
VPS25-204ENST00000589577 ARHGEF18Q6ZSZ5 1173 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms