RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DCUN1D3Q8IWE4 304 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 LAS2Q8IYD9 372 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 SYTL1Q8IYJ3 562 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 TBC1D21Q8IYX1 336 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 KRT78Q8N1N4 520 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 PACRGLQ8N7B6 248 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 ANKFN1Q8N957 763 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 FAM156AQ8NDB6 213 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 VPS37AQ8NEZ2 397 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 GTF2H4Q92759 462 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 PYCR2Q96C36 320 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 CXorf40BQ96DE9 158 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 CHFRQ96EP1 664 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 MED8Q96G25 268 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 OR52E6Q96RD3 313 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 OR52A5Q9H2C5 316 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 SGK2Q9HBY8 427 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 PREBQ9HCU5 417 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 CCDC177Q9NQR7 707 aaPredicted RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 FARSBQ9NSD9 589 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 GULP1Q9UBP9 304 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 FZD4Q9ULV1 537 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 NCKAP1Q9Y2A7 1128 aa10.07□□□□□ -0.8
VPS25-203ENST00000589520 WBP11Q9Y2W2 641 aaKnown RBP10.07□□□□□ -0.8
VPS25-203ENST00000589520 MUC22E2RYF6 1773 aaPredicted RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 K7EQS6 105 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 K7ESM1 405 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 RFXAPO00287 272 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 PLRG1O43660 514 aaKnown RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 SCELO95171 688 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 GLULP15104 373 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 DDX5P17844 614 aaKnown RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 FASP25445 335 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 PBLDP30039 288 aaPredicted RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 MSX2P35548 267 aaPredicted RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 GRIA3P42263 894 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 PIK3CBP42338 1070 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 BDKRB1P46663 353 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TAS2R38P59533 333 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 CTBSQ01459 385 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TAP2Q03519 686 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ACSM2AQ08AH3 577 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 MTAPQ13126 283 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 WSCD2Q2TBF2 565 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 FAM174BQ3ZCQ3 159 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 RUNDC3AQ59EK9 446 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ANXA8L1Q5VT79 327 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 LPCAT4Q643R3 524 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ACSM2BQ68CK6 577 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ANO7Q6IWH7 933 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SLC2A7Q6PXP3 512 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SUSD1Q6UWL2 747 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 USP30Q70CQ3 517 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ERMP1Q7Z2K6 904 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 C11orf96Q7Z7L8 435 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TICAM1Q8IUC6 712 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 KIAA2013Q8IYS2 634 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TMEM132CQ8N3T6 1108 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TMEM102Q8N9M5 508 aaPredicted RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 PAPD5Q8NDF8 572 aaKnown RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 TRPV3Q8NET8 790 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 OR8J2Q8NGG1 315 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ZNF480Q8WV37 535 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SLC5A11Q8WWX8 675 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 MTFMTQ96DP5 389 aaKnown RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 NSMCE2Q96MF7 247 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 CCDC115Q96NT0 180 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 GBP5Q96PP8 586 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 HHIPQ96QV1 700 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 HBEGFQ99075 208 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 PKP2Q99959 881 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SLC39A3Q9BRY0 314 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 TIMM29Q9BSF4 260 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ZDHHC5Q9C0B5 715 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 NT5DC2Q9H857 520 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 GORASP2Q9H8Y8 452 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 COPS7BQ9H9Q2 264 aaPredicted RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 FAM120CQ9NX05 1096 aaKnown RBP10.06□□□□□ -0.8
VPS25-203ENST00000589520 AHSPQ9NZD4 102 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 ASF1AQ9Y294 204 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
VPS25-203ENST00000589520 PIKFYVEQ9Y2I7 2098 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 PLK4O00444 970 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 ARPC2O15144 300 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 PRAMEF4O60810 478 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 RNASEH2AO75792 299 aaKnown RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 PCCBP05166 539 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 NPPBP16860 134 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 SDC1P18827 310 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 POU3F3P20264 500 aaPredicted RBP10.05□□□□□ -0.8
VPS25-203ENST00000589520 PEX2P28328 305 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 TIE1P35590 1138 aa10.05□□□□□ -0.8
VPS25-203ENST00000589520 KIR3DL1P43629 444 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms