RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SNRPB2P08579 225 aaKnown RBP11.67□□□□□ -0.54
CCBE1-203ENST00000589116 SRP54P61011 504 aaKnown RBP11.67□□□□□ -0.54
CCBE1-203ENST00000589116 DOC2AQ14183 400 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 AP5B1Q2VPB7 878 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PRAMEF14Q5SWL7 426 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 TPRG1LQ5T0D9 272 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PRAMEF13Q5VWM6 474 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 ATG9BQ674R7 924 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 C16orf89Q6UX73 402 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 SLCO4C1Q6ZQN7 724 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 Q6ZSR6 202 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 FBXO27Q8NI29 283 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 SMPDL3AQ92484 453 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 REPS1Q96D71 796 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 HBEGFQ99075 208 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 MENTQ9BUN1 341 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 TPSD1Q9BZJ3 242 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 EFCAB1Q9HAE3 211 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 LRTM1Q9HBL6 345 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 FARSBQ9NSD9 589 aaKnown RBP11.67□□□□□ -0.54
CCBE1-203ENST00000589116 C1orf109Q9NX04 203 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PCOLCE2Q9UKZ9 415 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 TDRKHQ9Y2W6 561 aaKnown RBP11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PCDHGA11Q9Y5H2 935 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 DGKBQ9Y6T7 804 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ACPPP15309 386 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 NPPBP16860 134 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 CD22P20273 847 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ITGAXP20702 1163 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 NDUFS1P28331 727 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 PGM1P36871 562 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 NUDT2P50583 147 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 DIO3P55073 304 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 LAPTM5Q13571 262 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 PUM1Q14671 1186 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ALG11Q2TAA5 492 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 PAGE2BQ5JRK9 111 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 CYB5D1Q6P9G0 228 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ABRAXAS1Q6UWZ7 409 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 TMPRSS11BQ86T26 416 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ZFAND4Q86XD8 727 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 KYQ8NBH2 561 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 CADM4Q8NFZ8 388 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 OR13H1Q8NG92 308 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 WDR20Q8TBZ3 569 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 SLC5A11Q8WWX8 675 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 NEIL2Q969S2 332 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 RCN3Q96D15 328 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 METTL2AQ96IZ6 378 aaKnown RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 FERD3LQ96RJ6 166 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 ACPTQ9BZG2 426 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 BRF2Q9HAW0 419 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 IMP3Q9NV31 184 aaKnown RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 EIF3LQ9Y262 564 aaKnown RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 TMED5Q9Y3A6 229 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 PLEKHM1Q9Y4G2 1056 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 CFAP20Q9Y6A4 193 aaKnown RBP11.66□□□□□ -0.54
CCBE1-203ENST00000589116 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
CCBE1-203ENST00000589116 DYTNA2CJ06 578 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 AIM2O14862 343 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 NDUFS2O75306 463 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 C1GALT1C1LP0DN25 315 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 PKLRP30613 574 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 RAB28P51157 221 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 RAP1GDS1P52306 607 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 RPL38P63173 70 aaKnown RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 SLC25A3Q00325 362 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 PRKG2Q13237 762 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 CLCA4Q14CN2 919 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 SGO1Q5FBB7 561 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 COQ5Q5HYK3 327 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 THEMIS2Q5TEJ8 643 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 DUS1LQ6P1R4 473 aaKnown RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 MED27Q6P2C8 311 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 PAOXQ6QHF9 649 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 DCP2Q8IU60 420 aaKnown RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 FUNDC1Q8IVP5 155 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 KIAA2013Q8IYS2 634 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 PGAM4Q8N0Y7 254 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 OR9I1Q8NGQ6 314 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 UBE2E3Q969T4 207 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 TSACCQ96A04 125 aaPredicted RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 CAMK1GQ96NX5 476 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 IL17FQ96PD4 163 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 ORAI3Q9BRQ5 295 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 C1orf50Q9BV19 199 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 PRPF19Q9UMS4 504 aaKnown RBP11.65□□□□□ -0.54
CCBE1-203ENST00000589116 TSC22D4Q9Y3Q8 395 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 COLEC10Q9Y6Z7 277 aa11.65□□□□□ -0.54
CCBE1-203ENST00000589116 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.55
CCBE1-203ENST00000589116 METTL12A8MUP2 240 aa11.65□□□□□ -0.55
CCBE1-203ENST00000589116 STK25O00506 426 aa11.65□□□□□ -0.55
CCBE1-203ENST00000589116 MGRN1O60291 552 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms