RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TAC3Q9UHF0 121 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 CDV3Q9UKY7 258 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 KLK4Q9Y5K2 254 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 ZNF292O60281 2723 aa16.37■□□□□ 0.21
SCAMP4-211ENST00000588907 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 SLC30A4O14863 429 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 KLF11O14901 512 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CAPN5O15484 640 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 C9P02748 559 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 RPLP0P05388 317 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 MYF5P13349 255 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 NPPBP16860 134 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CXCR2P25025 360 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CD1CP29017 333 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 PRDX3P30048 256 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 GDF5P43026 501 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 SPIDRQ14159 915 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 TRIP6Q15654 476 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CHI3L2Q15782 390 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 ZXDCQ2QGD7 858 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 AMZ1Q400G9 498 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 IRGCQ6NXR0 463 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 TMEM71Q6P5X7 295 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 GOLGA7Q7Z5G4 137 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 MTERF4Q7Z6M4 381 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CHCHD4Q8N4Q1 142 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 TBC1D19Q8N5T2 526 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 TEX9Q8N6V9 391 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 CCNYL1Q8N7R7 359 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 OR4D9Q8NGE8 314 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 MDM1Q8TC05 714 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 SLC5A11Q8WWX8 675 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 ZUFSPQ96AP4 578 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 OR2A14Q96R47 310 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 GFM1Q96RP9 751 aaKnown RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 MECRQ9BV79 373 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 PITHD1Q9GZP4 211 aaPredicted RBP16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 PELI2Q9HAT8 420 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 MLXIPLQ9NP71 852 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 SPHK1Q9NYA1 384 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 RAPGEFL1Q9UHV5 662 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 PCM1Q15154 2024 aa16.36■□□□□ 0.21
SCAMP4-211ENST00000588907 NTN3O00634 580 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 FGF3P11487 239 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 CEACAM1P13688 526 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 PEBP1P30086 187 aaKnown RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 GRK3P35626 688 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 CCNG1P51959 295 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 PKNOX1P55347 436 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 CCL7P80098 99 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 RELAQ04206 551 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 CLCQ05315 142 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 LAPTM5Q13571 262 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 RCN2Q14257 317 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 TBCCQ15814 346 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 C18orf21Q32NC0 220 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 UNC50Q53HI1 259 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 PAGE2BQ5JRK9 111 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 C10orf62Q5T681 223 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 PRSS42Q7Z5A4 293 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 KMT5CQ86Y97 462 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 C2orf73Q8N5S3 287 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 ABHD11Q8NFV4 315 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 OR6Y1Q8NGX8 325 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 ATP6V1E2Q96A05 226 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 OR4K3Q96R72 315 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 ZNF382Q96SR6 550 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 EFCAB11Q9BUY7 163 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 NTMT1Q9BV86 223 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 GATA5Q9BWX5 397 aaPredicted RBP16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 CHRNA10Q9GZZ6 450 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 DRC3Q9H069 523 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 SEMA6CQ9H3T2 930 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 IPPKQ9H8X2 491 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 FAM53CQ9NYF3 392 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 SNX7Q9UNH6 387 aa16.35■□□□□ 0.21
SCAMP4-211ENST00000588907 RP1P56715 2156 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 WDR91A4D1P6 747 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 D6RAR5 112 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 TMX2-CTNND1H3BSU7 103 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 HGSO14964 777 aaPredicted RBP16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ANKRD34CP0C6C1 535 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 EBLN1P0CF75 366 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 CDH3P22223 829 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 GSTM2P28161 218 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 CCR8P51685 355 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 TRA2AQ13595 282 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 RBBP7Q16576 425 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 GGTA1PQ4G0N0 100 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 FBXO48Q5FWF7 155 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 LIPJQ5W064 366 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ATG9BQ674R7 924 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 FLVCR1-AS1Q8TAF5 88 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 LRRC8CQ8TDW0 803 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 NEIL2Q969S2 332 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 UBE2E3Q969T4 207 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 ESAMQ96AP7 390 aa16.34■□□□□ 0.21
SCAMP4-211ENST00000588907 WDR34Q96EX3 536 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms