RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	SULT2A1	Q06520	285 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	ARHGAP1	Q07960	439 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	ITPRIPL2	Q3MIP1	535 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	DNAJC21	Q5F1R6	531 aa	Known RBP	5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	LRRC38	Q5VT99	294 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	FAM46C	Q5VWP2	391 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	ZNF425	Q6IV72	752 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	CORO6	Q6QEF8	472 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	ANKRD33	Q7Z3H0	272 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	EXOC3L1	Q86VI1	746 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	MMD2	Q8IY49	270 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	KLHDC8A	Q8IYD2	350 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	LGI2	Q8N0V4	545 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	KCNH5	Q8NCM2	988 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	LRRC8C	Q8TDW0	803 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	CKAP2	Q8WWK9	683 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	PGM2	Q96G03	612 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	EEF2KMT	Q96G04	330 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	CDKN2AIPNL	Q96HQ2	116 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	GDAP1L1	Q96MZ0	367 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	FSD1	Q9BTV5	496 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	CDK19	Q9BWU1	502 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	XPO4	Q9C0E2	1151 aa	Known RBP	5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	MIS12	Q9H081	205 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	RAB9B	Q9NP90	201 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	SPHK1	Q9NYA1	384 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	PTTG2	Q9NZH5	202 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	HMG20B	Q9P0W2	317 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	TDRKH	Q9Y2W6	561 aa	Known RBP	5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	TEX264	Q9Y6I9	313 aa		5.09	□□□□□ -1.59
TUBD1-208	ENST00000588009	DNAJC9-AS1	A6NH13	148 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SLC9B1P1	A6NJY1	282 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	HNRNPCL2	B2RXH8	293 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PRSS46	E5RG02	174 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	CACNB4	O00305	520 aa	Predicted RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	CAPN9	O14815	690 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PRPSAP2	O60256	369 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	STAM2	O75886	525 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	BAG4	O95429	457 aa	Known RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SBK2	P0C263	348 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZNF81	P51508	661 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	CASP9	P55211	416 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	MBTD1	Q05BQ5	628 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SF3B4	Q15427	424 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	ODF4	Q2M2E3	257 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	IFI44L	Q53G44	452 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	LYSMD4	Q5XG99	296 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	CATSPER4	Q7RTX7	472 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SLC9B2	Q86UD5	537 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SFR1	Q86XK3	245 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	DNAJC10	Q8IXB1	793 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZNF441	Q8N8Z8	693 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	KIAA0895	Q8NCT3	520 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	NEK11	Q8NG66	645 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	RNASE8	Q8TDE3	154 aa	Known RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SLC26A7	Q8TE54	656 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PYCR2	Q96C36	320 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PHF21B	Q96EK2	531 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	RUFY1	Q96T51	708 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SEZ6L	Q9BYH1	1024 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	ABCG8	Q9H221	673 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	C1orf21	Q9H246	121 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PELI2	Q9HAT8	420 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	APOBEC3G	Q9HC16	384 aa	Known RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	A4GALT	Q9NPC4	353 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	SLC38A7	Q9NVC3	462 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	PKD2L2	Q9NZM6	624 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	POU2F3	Q9UKI9	436 aa		5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	RUVBL2	Q9Y230	463 aa	Known RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.08	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZNF521	Q96K83	1311 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009		A0A0B4J203	849 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	RNF103-CHMP3	A0A140T963	221 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	TMEM150C	B9EJG8	249 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009		H0YIG0	161 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	RNF103	O00237	685 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	SLC28A2	O43868	658 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	SERPING1	P05155	500 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	FCGR1A	P12314	374 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	IL10	P22301	178 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	CCKBR	P32239	447 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	NKX2-1	P43699	371 aa	Predicted RBP	5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	OR3A1	P47881	315 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	VAMP7	P51809	220 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	LUM	P51884	338 aa	Predicted RBP	5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	C21orf58	P58505	322 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	AKAP17A	Q02040	695 aa	Known RBP	5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	GFPT1	Q06210	699 aa	Predicted RBP	5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	CACNG1	Q06432	222 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	KLC1	Q07866	573 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZBTB17	Q13105	803 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	RBBP7	Q16576	425 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	PHKG1	Q16816	387 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZNF260	Q3ZCT1	412 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	TOR1AIP1	Q5JTV8	583 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	STXBP5	Q5T5C0	1151 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	IRAK1BP1	Q5VVH5	260 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	KCTD11	Q693B1	232 aa		5.07	□□□□□ -1.6
TUBD1-208	ENST00000588009	ZNF549	Q6P9A3	640 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms