RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OGNP20774 298 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 ATP5DP30049 168 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 ADARP55265 1226 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 SOX8P57073 446 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 SARNPP82979 210 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 DHX34Q14147 1143 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 NR6A1Q15406 480 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 FAM214AQ32MH5 1076 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 ANKRD20A4Q4UJ75 823 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 ZNF470Q6ECI4 717 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 IGFL3Q6UXB1 125 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 DENND6AQ8IWF6 608 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 PARP9Q8IXQ6 854 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 IQCKQ8N0W5 287 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 ZNF669Q96BR6 464 aaPredicted RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 PKP4Q99569 1192 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 ILKAPQ9H0C8 392 aaPredicted RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 SLC26A1Q9H2B4 701 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 FBXO6Q9NRD1 293 aaPredicted RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 ENAMQ9NRM1 1142 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 SAMD15Q9P1V8 674 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 PPP2R2CQ9Y2T4 447 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 FER1L5A0AVI2 2057 aa13.7□□□□□ -0.22
VMP1-206ENST00000587945 USP9YO00507 2555 aaPredicted RBP13.7□□□□□ -0.22
VMP1-206ENST00000587945 NBPF19A0A087WUL8 3843 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 IGKV1-8A0A0C4DH67 115 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 VSTM2BA6NLU5 285 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 H0YGG7 62 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 MYO1CO00159 1063 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 PSIP1O75475 530 aaKnown RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 ERGP11308 486 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CMPK1P30085 196 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CLCN7P51798 805 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 ARF3P61204 181 aaPredicted RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 CTBP1Q13363 440 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CUL1Q13616 776 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 THOC5Q13769 683 aaKnown RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 RBBP7Q16576 425 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 HIF1AQ16665 826 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CUZD1Q86UP6 607 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 ZADH2Q8N4Q0 377 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 PRR7Q8TB68 274 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 SMPDL3AQ92484 453 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 NACC2Q96BF6 587 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 C10orf90Q96M02 699 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 ZFYVE21Q9BQ24 234 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 CRB3Q9BUF7 120 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 SLC29A3Q9BZD2 475 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 ZNF304Q9HCX3 659 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 MRPS30Q9NP92 439 aaKnown RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 ABCF3Q9NUQ8 709 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
VMP1-206ENST00000587945 RP1L1Q8IWN7 2480 aaPredicted RBP13.69□□□□□ -0.22
VMP1-206ENST00000587945 ZCWPW2A0A1B0GU75 182 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 FAM237BA0A1B0GVD1 139 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 FFAR3O14843 346 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 GPR42O15529 346 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 KIF5CO60282 957 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 KLHL41O60662 606 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 USP1O94782 785 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 CATP04040 527 aaKnown RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 ERVK-10P10266 1014 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 RPA3P35244 121 aaPredicted RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 COILP38432 576 aaPredicted RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 GLRBP48167 497 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 KLC1Q07866 573 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 Q0VFX4 171 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 PRTGQ2VWP7 1150 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 VWA2Q5GFL6 755 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 CRB2Q5IJ48 1285 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 ZNF549Q6P9A3 640 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 Q6ZS92 163 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 AGGF1Q8N302 714 aaeCLIP13.68□□□□□ -0.22
VMP1-206ENST00000587945 RASGEF1CQ8N431 466 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 OR11G2Q8NGC1 345 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 STT3BQ8TCJ2 826 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 SSC4DQ8WTU2 575 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 TM9SF4Q92544 642 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 C8orf44Q96CB5 159 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 CABS1Q96KC9 395 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 PLCD4Q9BRC7 762 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 SEMA3GQ9NS98 782 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 INTS10Q9NVR2 710 aaKnown RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 TAC3Q9UHF0 121 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 NXT1Q9UKK6 140 aaKnown RBP13.68□□□□□ -0.22
VMP1-206ENST00000587945 NTNG1Q9Y2I2 539 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms