RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SP140Q13342 867 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 GTF2H2Q13888 395 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 CDKN3Q16667 212 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 VPS26BQ4G0F5 336 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 LIN52Q52LA3 116 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 C6orf136Q5SQH8 315 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 ATXN7L2Q5T6C5 722 aaPredicted RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 GPRC6AQ5T6X5 926 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 INTS11Q5TA45 600 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 CACHD1Q5VU97 1274 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 IL23RQ5VWK5 629 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 FAM46CQ5VWP2 391 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 PPP4R4Q6NUP7 873 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 GTF2H2CQ6P1K8 395 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 IGF2-ASQ6U949 168 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 SBSNQ6UWP8 590 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 GDPD4Q6W3E5 623 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 NEK10Q6ZWH5 1172 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 RPS27LQ71UM5 84 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 GOLGA7Q7Z5G4 137 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 RALGPS2Q86X27 583 aaPredicted RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 HID1Q8IV36 788 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 SLC15A3Q8IY34 581 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 TBC1D21Q8IYX1 336 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 NXPE1Q8N323 547 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 RNF148Q8N7C7 305 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 FNDC5Q8NAU1 212 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 PAPD5Q8NDF8 572 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 TRPV3Q8NET8 790 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 OR2A12Q8NGT7 310 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 WFDC5Q8TCV5 224 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 FRS2Q8WU20 508 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 ZFAND2BQ8WV99 257 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 EZH1Q92800 747 aaPredicted RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 PPWD1Q96BP3 646 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 ECHDC3Q96DC8 303 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 RPL10LQ96L21 214 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 ZNF597Q96LX8 424 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 KLHL32Q96NJ5 620 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 MCCC1Q96RQ3 725 aaPredicted RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 COPS8Q99627 209 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 PKP2Q99959 881 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 C9orf16Q9BUW7 83 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 NTMT1Q9BV86 223 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 MRPS26Q9BYN8 205 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 OSBPL6Q9BZF3 934 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 CD244Q9BZW8 370 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 CIPCQ9C0C6 399 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 NOL11Q9H8H0 719 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 FBRSL1Q9HCM7 1045 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 BPIFA1Q9NP55 256 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 SARS2Q9NP81 518 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 SLC52A3Q9NQ40 469 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 FAM86C1Q9NVL1 165 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 OPTCQ9UBM4 332 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 DKK3Q9UBP4 350 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 EVLQ9UI08 416 aaPredicted RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 EIF2B4Q9UI10 523 aaKnown RBP5.6□□□□□ -1.51
SDF2-206ENST00000587788 CRLS1Q9UJA2 301 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 SNX13Q9Y5W8 968 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 ST14Q9Y5Y6 855 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 ACTL7AQ9Y615 435 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 RALGAPA1Q6GYQ0 2036 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 MYLKQ15746 1914 aa5.6□□□□□ -1.51
SDF2-206ENST00000587788 F5P12259 2224 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 CKAP5Q14008 2032 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 TP53BP1Q12888 1972 aaPredicted RBP5.59□□□□□ -1.51
SDF2-206ENST00000587788 ANKRD36A6QL64 1941 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 IGLV3-16A0A075B6K0 115 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 EDDM13A0A1B0GTR0 161 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 DHRS12A0PJE2 317 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 LRRC14BA6NHZ5 514 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 NCF1BA6NI72 391 aaPredicted RBP5.59□□□□□ -1.51
SDF2-206ENST00000587788 FAM170BA6NMN3 283 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 NCF1CA8MVU1 366 aaPredicted RBP5.59□□□□□ -1.51
SDF2-206ENST00000587788 H0Y858 1186 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 K7EPI3 171 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 K7ERQ8 282 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 FXYD1O00168 92 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 PPP6CO00743 305 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 NME4O00746 187 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 MAN2B1O00754 1011 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 GAPDHSO14556 408 aaPredicted RBP5.59□□□□□ -1.51
SDF2-206ENST00000587788 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 KLF4O43474 513 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 SMAD6O43541 496 aaKnown RBP5.59□□□□□ -1.51
SDF2-206ENST00000587788 ULK1O75385 1050 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 STK16O75716 305 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 AP2A2O94973 939 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 OR4F21O95013 312 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 KAT7O95251 611 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 TRIM16O95361 564 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 TIAF1O95411 115 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 CLDN9O95484 217 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 CLPTM1O96005 669 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 KRT6AP02538 564 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 KRT6BP04259 564 aa5.59□□□□□ -1.51
SDF2-206ENST00000587788 IL6P05231 212 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms