RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 HIST1H2AGP0C0S8 130 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 ZNF37AP17032 561 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 HIST1H2ADP20671 130 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 STX2P32856 288 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 MAGEA4P43358 317 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 SLC12A2P55011 1212 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 RPS18P62269 152 aaKnown RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 TBPL1P62380 186 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 TAP2Q03519 686 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 COL9A2Q14055 689 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 DEFB109BQ30KR1 87 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 CRTC2Q53ET0 693 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 RHBDD2Q6NTF9 364 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 FAM198BQ6UWH4 519 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 MBOAT1Q6ZNC8 495 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 ADCK2Q7Z695 626 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 MMGT1Q8N4V1 131 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 ENDOVQ8N8Q3 282 aaKnown RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 TTC29Q8NA56 475 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 NOA1Q8NC60 698 aaKnown RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 PROKR1Q8TCW9 393 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 SEC14L1Q92503 715 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 DLG3Q92796 817 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 HIST1H2AHQ96KK5 128 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 CCDC138Q96M89 665 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 HIST1H2AJQ99878 128 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 DPH2Q9BQC3 489 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 H2AFJQ9BTM1 129 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 PARVBQ9HBI1 364 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 SMYD2Q9NRG4 433 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 STOX2Q9P2F5 926 aaPredicted RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 ANKMY1Q9P2S6 941 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 DHCR7Q9UBM7 475 aaKnown RBP14.22□□□□□ -0.13
ATG4D-207ENST00000587256 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 SNX7Q9UNH6 387 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 PDE10AQ9Y233 779 aa14.22□□□□□ -0.13
ATG4D-207ENST00000587256 SPTBP11277 2137 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 A0A0J9YVX5 310 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 H3BMH7 237 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 PRB1P04280 392 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 FAM87AP0C7U9 286 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 PTPN4P29074 926 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 CCR10P46092 362 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 VSX2P58304 361 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 YBX1P67809 324 aaKnown RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ABATP80404 500 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ZNF460Q14592 562 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 GRM7Q14831 915 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 SLC9A5Q14940 896 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 PHKG1Q16816 387 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 LINC00303Q3SY05 128 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 TCTE1Q5JU00 501 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 PRAMEF13Q5VWM6 474 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 LCN10Q6JVE6 187 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ZNF517Q6ZMY9 492 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 C3orf62Q6ZUJ4 267 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 RNF44Q7L0R7 432 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 SYVN1Q86TM6 617 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ALKBH8Q96BT7 664 aaKnown RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 MED8Q96G25 268 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 CPNE1Q99829 537 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ZFYVE21Q9BQ24 234 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 C17orf62Q9BQA9 187 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 TRIM54Q9BYV2 358 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 STARD5Q9NSY2 213 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 ARL15Q9NXU5 204 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 UTP6Q9NYH9 597 aaKnown RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 MTRF1LQ9UGC7 380 aaKnown RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 GPN3Q9UHW5 284 aaPredicted RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 POLHQ9Y253 713 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 FARSAQ9Y285 508 aaKnown RBP14.21□□□□□ -0.13
ATG4D-207ENST00000587256 PADI2Q9Y2J8 665 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 KLK4Q9Y5K2 254 aa14.21□□□□□ -0.13
ATG4D-207ENST00000587256 OR2A25A4D2G3 310 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 FAM159BA6NKW6 160 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 CXorf49A8MYA2 514 aaPredicted RBP14.2□□□□□ -0.14
ATG4D-207ENST00000587256 EIF2S1P05198 315 aaKnown RBP14.2□□□□□ -0.14
ATG4D-207ENST00000587256 RAB40ALP0C0E4 278 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 GP5P40197 560 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 ARSFP54793 590 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 TAS2R39P59534 338 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 GPX6P59796 221 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 PRDX1Q06830 199 aaKnown RBP14.2□□□□□ -0.14
ATG4D-207ENST00000587256 NCF4Q15080 339 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 FRMPD2BQ6IN97 320 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 AGTRAPQ6RW13 159 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 TTLL10Q6ZVT0 673 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 NKAPQ8N5F7 415 aaKnown RBP14.2□□□□□ -0.14
ATG4D-207ENST00000587256 PPM1NQ8N819 430 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 TSPAN17Q96FV3 270 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 GBP5Q96PP8 586 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 RBBP8Q99708 897 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 PLCD4Q9BRC7 762 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 NLNQ9BYT8 704 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 FAM117AQ9C073 453 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 ATG10Q9H0Y0 220 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 GPAMQ9HCL2 828 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 CUTCQ9NTM9 273 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 ZDHHC18Q9NUE0 388 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms