RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 AADATQ8N5Z0 425 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 UCN3Q969E3 161 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 TUBGCP5Q96RT8 1024 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ZNF184Q99676 751 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 SLC29A1Q99808 456 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 P2RY12Q9H244 342 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ADNPQ9H2P0 1102 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 BATF3Q9NR55 127 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 MANBAO00462 879 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 SOCS5O75159 536 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 BCKDHAP12694 445 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 MAPK8P45983 427 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 TNFAIP8L2Q6P589 184 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 AMZ2Q86W34 360 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PROKR1Q8TCW9 393 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 FAM120BQ96EK7 910 aaKnown RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 FAM129BQ96TA1 746 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 MCMBPQ9BTE3 642 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PRDM6Q9NQX0 595 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RHCGQ9UBD6 479 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 FBXW2Q9UKT8 454 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CDH7Q9ULB5 785 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 C1QTNF3-AMACRE9PGA6 284 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RFXANKO14593 260 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RGS14O43566 566 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 SLC35G4P0C7Q5 338 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ACPPP15309 386 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 GPX3P22352 226 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 OPRD1P41143 372 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 PIGFQ07326 219 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 TRAF3Q13114 568 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 MED21Q13503 144 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ZNF750Q32MQ0 723 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 NANOGP8Q6NSW7 305 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 SPESP1Q6UW49 350 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 NET1Q7Z628 596 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 ZC3H7AQ8IWR0 971 aaKnown RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 C10orf111Q8N326 155 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 ACTRT2Q8TDY3 377 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 RAB8BQ92930 207 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 CIDECQ96AQ7 238 aaPredicted RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 NMD3Q96D46 503 aaKnown RBP9.98□□□□□ -0.81
RFFL-212ENST00000584655 SFXN1Q9H9B4 322 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 NANOGQ9H9S0 305 aa9.98□□□□□ -0.81
RFFL-212ENST00000584655 LAMP2P13473 410 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 POU1F1P28069 291 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 SPDYE7PQ495Y7 208 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 GLYATQ6IB77 296 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PQLC1Q8N2U9 271 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 CPXM2Q8N436 756 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 WDR26Q9H7D7 661 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 WDR37Q9Y2I8 494 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 SH3GLB1Q9Y371 365 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 NLRC5Q86WI3 1866 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 TCRBV21S2A2A0A5A6 115 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PTGES3LE9PB15 166 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 OR6B1O95007 311 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 MASP1P48740 699 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 ITPRIPL2Q3MIP1 535 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 ZNF614Q8N883 585 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 SPPL2AQ8TCT8 520 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 ZNF480Q8WV37 535 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 GRIP2Q9C0E4 1043 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 REXO4Q9GZR2 422 aaKnown RBP9.97□□□□□ -0.81
RFFL-212ENST00000584655 MEAF6Q9HAF1 191 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 TRPC4Q9UBN4 977 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 FBXL21Q9UKT6 434 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 KCNE2Q9Y6J6 123 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 MAGEC1O60732 1142 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 FTH1P02794 183 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 LAMP1P11279 417 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 ADSLP30566 484 aaPredicted RBP9.97□□□□□ -0.81
RFFL-212ENST00000584655 MTTPP55157 894 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 FOLH1Q04609 750 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 TP53BP2Q13625 1128 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 VTCN1Q7Z7D3 282 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 KIAA2013Q8IYS2 634 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PGAM4Q8N0Y7 254 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 ADCY4Q8NFM4 1077 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 WDR48Q8TAF3 677 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 C17orf62Q9BQA9 187 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 KLHL4Q9C0H6 718 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 MIEF1Q9NQG6 463 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 NUDT4Q9NZJ9 180 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PADI4Q9UM07 663 aa9.97□□□□□ -0.81
RFFL-212ENST00000584655 PTPRDP23468 1912 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 A0A0J9YVX5 310 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 B4GAT1O43505 415 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 RPS17P08708 135 aaKnown RBP9.96□□□□□ -0.81
RFFL-212ENST00000584655 GNAO1P09471 354 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 ENPP6Q6UWR7 440 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 HUS1BQ8NHY5 278 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 SLC32A1Q9H598 525 aa9.96□□□□□ -0.81
RFFL-212ENST00000584655 STX18Q9P2W9 335 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms