RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 KLHL1Q9NR64 748 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 ZDHHC3Q9NYG2 299 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 PLAGL1Q9UM63 463 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 KLK4Q9Y5K2 254 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
CSNK1D-219ENST00000581660 TRBV5-4A0A0C4DH59 114 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 FAM237BA0A1B0GVD1 139 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 TARM1B6A8C7 271 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 CTSVO60911 334 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 PROSCO94903 275 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 FKBP9O95302 570 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 S1PR4O95977 384 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 CD46P15529 392 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 ZNF24P17028 368 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 CD96P40200 585 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 EMP3P54852 163 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 VSX2P58304 361 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 MPP3Q13368 585 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 GPR33Q49SQ1 333 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 CLYBLQ8N0X4 340 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 AMER2Q8N7J2 671 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 FAM98AQ8NCA5 519 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 NUDT8Q8WV74 236 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 ZUFSPQ96AP4 578 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 C10orf90Q96M02 699 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 OLFM1Q99784 485 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 HRH3Q9Y5N1 445 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 FAM169AQ9Y6X4 670 aa13.12□□□□□ -0.31
CSNK1D-219ENST00000581660 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 APOL1O14791 398 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 AP2A2O94973 939 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 HEXBP07686 556 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 ACRV1P26436 265 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 ADSLP30566 484 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 DGKQP52824 942 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 TAZQ16635 292 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 MUM1Q2TAK8 710 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 RNFT1Q5M7Z0 435 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 GALNTL5Q7Z4T8 443 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 CLDN19Q8N6F1 224 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 MYRIPQ8NFW9 859 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 RND1Q92730 232 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 FAM96AQ9H5X1 160 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
CSNK1D-219ENST00000581660 ZANQ9Y493 2812 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 A0A1B0GTH6 734 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 SLC5A10A0PJK1 596 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 A8MUI8 341 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 FAM171A2A8MVW0 826 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PRPF4O43172 522 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■■■ 36
CSNK1D-219ENST00000581660 NEURL1O76050 574 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 SP1P08047 785 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 CD9P21926 228 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PTGS2P35354 604 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 EFNA3P52797 238 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 FRMPD2BQ6IN97 320 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 CPSF7Q8N684 471 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 AMER3Q8N944 861 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 NPAS2Q99743 824 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 MKKSQ9NPJ1 570 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 LRFN1Q9P244 771 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 CDC14AQ9UNH5 594 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 DNAJC13O75165 2243 aa13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-219ENST00000581660 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 CDK2AP1O14519 115 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 SUN1O94901 812 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 MBD3O95983 291 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 TPOP07202 933 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 HOXC12P31275 282 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 PTGER1P34995 402 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 SLC26A3P40879 764 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 DLX5P56178 289 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 YBX1P67809 324 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 PLOD1Q02809 727 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 MSLNQ13421 630 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 NR1I3Q14994 352 aa13.09□□□□□ -0.31
CSNK1D-219ENST00000581660 MEP1AQ16819 746 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms