RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 SLC22A18Q96BI1 424 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 CLEC4MQ9H2X3 399 aaPredicted RBP13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 C14orf105Q9NVL8 296 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 LRFN1Q9P244 771 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 ZC3H7BQ9UGR2 993 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 MKL2Q9ULH7 1088 aa13.38□□□□□ -0.27
PPP4R1-206ENST00000577779 APOL1O14791 398 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 SRPX2O60687 465 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 GSTM1P09488 218 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 SKILP12757 684 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 PKLRP30613 574 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 PTGER1P34995 402 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 PTGS2P35354 604 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 CD96P40200 585 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 PRKCIP41743 596 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 GSTM4Q03013 218 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 BRD3Q15059 726 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 TAF1AQ15573 450 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 SF1Q15637 639 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 SLC9A4Q6AI14 798 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 SNX20Q7Z614 316 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 CAMKMTQ7Z624 323 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 TAX1BP1Q86VP1 789 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 CLDN19Q8N6F1 224 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 LINC01555Q8NAE3 123 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 ACRBPQ8NEB7 543 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 OXNAD1Q96HP4 312 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 GPATCH1Q9BRR8 931 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 ZDHHC3Q9NYG2 299 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 STOX2Q9P2F5 926 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 FAM169AQ9Y6X4 670 aa13.37□□□□□ -0.27
PPP4R1-206ENST00000577779 IGLV3-16A0A075B6K0 115 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 LRRD1A4D1F6 860 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 KLK8O60259 260 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 CTSVO60911 334 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 CYP1A2P05177 515 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 EIF2S1P05198 315 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 FASTKQ14296 549 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 TAZQ16635 292 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 MUM1Q2TAK8 710 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 RNFT1Q5M7Z0 435 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 FRMPD2BQ6IN97 320 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 ZZZ3Q8IYH5 903 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 HORMAD2Q8N7B1 307 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 LMNTD1Q8N9Z9 388 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 MYRIPQ8NFW9 859 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 OR13C4Q8NGS5 318 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 PWWP2AQ96N64 755 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 FICDQ9BVA6 458 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 MAK16Q9BXY0 300 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 GNPTGQ9UJJ9 305 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 CDC14AQ9UNH5 594 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 L3MBTL1Q9Y468 752 aa13.36□□□□□ -0.27
PPP4R1-206ENST00000577779 C5orf60A6NFR6 353 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 FAM171A2A8MVW0 826 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■■□□ 18.5
PPP4R1-206ENST00000577779 SEC24DO94855 1032 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 SUN1O94901 812 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 PROSCO94903 275 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 S1PR4O95977 384 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 C8BP07358 591 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 SP1P08047 785 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 ERVK-10P10266 1014 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 PCSK6P29122 969 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 CDKN1CP49918 316 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 DYNLT1P63172 113 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 OC90Q02509 493 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 WASHC5Q12768 1159 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 MPP3Q13368 585 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 MEP1AQ16819 746 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 BTBD16Q32M84 506 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 GPR33Q49SQ1 333 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 TMEM205Q6UW68 189 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 SERPINA9Q86WD7 417 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 GOT1L1Q8NHS2 421 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 ELMO1Q92556 727 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 ZUFSPQ96AP4 578 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 SEC16BQ96JE7 1060 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 CABS1Q96KC9 395 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 C10orf90Q96M02 699 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 KLHL8Q9P2G9 620 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 CIDEBQ9UHD4 219 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 DNAJC13O75165 2243 aa13.35□□□□□ -0.27
PPP4R1-206ENST00000577779 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
PPP4R1-206ENST00000577779 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
PPP4R1-206ENST00000577779 A0A0J9YVX5 310 aa13.34□□□□□ -0.27
PPP4R1-206ENST00000577779 A0A1B0GTH9 108 aa13.34□□□□□ -0.27
PPP4R1-206ENST00000577779 ZNF487B1APH4 448 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms