RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
SSH2-205ENST00000577483 DHRS7Q9Y394 339 aa12.14□□□□□ -0.47
SSH2-205ENST00000577483 PCDHGA9Q9Y5G4 932 aaKnown RBP12.14□□□□□ -0.47
SSH2-205ENST00000577483 SETXQ7Z333 2677 aaKnown RBP12.14□□□□□ -0.47
SSH2-205ENST00000577483 FITM1A5D6W6 292 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 GFYI3L273 518 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 MASP2O00187 686 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 DSCR3O14972 297 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 FOLR3P41439 243 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 PNLIPRP1P54315 467 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 ARSFP54793 590 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 DR1Q01658 176 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 KCNC4Q03721 635 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 GRM7Q14831 915 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 TCTE1Q5JU00 501 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 HP1BP3Q5SSJ5 553 aaPredicted RBP12.13□□□□□ -0.47
SSH2-205ENST00000577483 RBM20Q5T481 1227 aaKnown RBP12.13□□□□□ -0.47
SSH2-205ENST00000577483 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 CNTN4Q8IWV2 1026 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 LRRC56Q8IYG6 542 aaPredicted RBP12.13□□□□□ -0.47
SSH2-205ENST00000577483 METTL27Q8N6F8 245 aaPredicted RBP12.13□□□□□ -0.47
SSH2-205ENST00000577483 FBXO15Q8NCQ5 510 aaPredicted RBP12.13□□□□□ -0.47
SSH2-205ENST00000577483 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 ASB11Q8WXH4 323 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 DLG3Q92796 817 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 INPP5DQ92835 1189 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 CERS2Q96G23 380 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 C17orf62Q9BQA9 187 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 DPH7Q9BTV6 452 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 NUDT9Q9BW91 350 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 KLHL42Q9P2K6 505 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 TAC3Q9UHF0 121 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 SAR1BQ9Y6B6 198 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 COMMD10Q9Y6G5 202 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
SSH2-205ENST00000577483 E7ENX8 843 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 TTI1O43156 1089 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 VPS26AO75436 327 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 ONECUT2O95948 504 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 CMPK1P30085 196 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 ELK3P41970 407 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 PGDP52209 483 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 PGGT1BP53609 377 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 TAP2Q03519 686 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 TSTA3Q13630 321 aaPredicted RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 SSPNQ14714 243 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 ARHGAP19Q14CB8 494 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 MORF4L2Q15014 288 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 IGFBP7Q16270 282 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 WASHC2DQ5SRD0 308 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 ZNF425Q6IV72 752 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 FBXO42Q6P3S6 717 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 MED25Q71SY5 747 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 PPP1R32Q7Z5V6 425 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 TMEM102Q8N9M5 508 aaPredicted RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 SMPDL3AQ92484 453 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 STOX2Q9P2F5 926 aaPredicted RBP12.12□□□□□ -0.47
SSH2-205ENST00000577483 CTSFQ9UBX1 484 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 ADAMTS6Q9UKP5 1117 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 CHMP2BQ9UQN3 213 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 FLNCQ14315 2725 aa12.12□□□□□ -0.47
SSH2-205ENST00000577483 A6NL46 340 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 TTC4O95801 387 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 AHSGP02765 367 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 IMPA1P29218 277 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 RPA3P35244 121 aaPredicted RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 SKIV2L2P42285 1042 aaKnown RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 OR1D4P47884 311 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 ITGA8P53708 1063 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 CDKN2DP55273 166 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 RAPSNQ13702 412 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 NKG7Q16617 165 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 NADK2Q4G0N4 442 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 YOD1Q5VVQ6 348 aaPredicted RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 ICE2Q659A1 982 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 PAQR7Q86WK9 346 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 TTC29Q8NA56 475 aaPredicted RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 TEX19Q8NA77 164 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 SPSB2Q99619 263 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 ZFYVE21Q9BQ24 234 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 PLCD4Q9BRC7 762 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
SSH2-205ENST00000577483 TEX264Q9Y6I9 313 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 MAU2Q9Y6X3 613 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 NBASA2RRP1 2371 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 HYKKA2RU49 373 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 H0YGG7 62 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 SMAPO00193 183 aa12.11□□□□□ -0.47
SSH2-205ENST00000577483 SRPX2O60687 465 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms