RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 EFNA3P52797 238 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 PLOD1Q02809 727 aaPredicted RBP9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 ITIH4Q14624 930 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 SYT16Q17RD7 645 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 CCSMST1Q4G0I0 132 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 DNAJC21Q5F1R6 531 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 ABHD17BQ5VST6 288 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 FCRLBQ6BAA4 426 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 C3P1Q6ZMU1 363 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 MEX3BQ6ZN04 569 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 RIPOR1Q6ZS17 1223 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 BBS12Q6ZW61 710 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 NEK10Q6ZWH5 1172 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 LUZP1Q86V48 1076 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 SLC22A15Q8IZD6 547 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 MMP21Q8N119 569 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 ACTL9Q8TC94 416 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 STYXQ8WUJ0 223 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 IQCDQ96DY2 449 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 C10orf90Q96M02 699 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 GPR137Q96N19 417 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 MIPEPQ99797 713 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 TMEM121Q9BTD3 319 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 HES7Q9BYE0 225 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 RNF32Q9H0A6 362 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 KLHL1Q9NR64 748 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 ANKRD10Q9NXR5 420 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 TRPC4Q9UBN4 977 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 NPIPA1Q9UND3 350 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 GTF3C1Q12789 2109 aa9.61□□□□□ -0.87
NPLOC4-220ENST00000576940 VPS13CQ709C8 3753 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 IGHV3-20A0A0C4DH32 117 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 A0A1W2PQ72 361 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 APOC4-APOC2K7ER74 178 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 QSOX1O00391 747 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 RASGRF2O14827 1237 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 GPC4O75487 556 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 MBD3O95983 291 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 APOC2P02655 101 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 MYBL2P10244 700 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 RBP3P10745 1247 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 FOXN2P32314 431 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 ART1P52961 327 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 HSF1Q00613 529 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 ALDH6A1Q02252 535 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 MUM1Q2TAK8 710 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 CCDC181Q5TID7 509 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 SPINK14Q6IE38 97 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 DARS2Q6PI48 645 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 PACS1Q6VY07 963 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 Q6ZPB1 254 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 DOLPP1Q86YN1 238 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 KATNAL2Q8IYT4 538 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 SHISA5Q8N114 240 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 ACBD4Q8NC06 268 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 OR8K1Q8NGG5 319 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 LKAAEAR1Q8TD35 194 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 KRT35Q92764 455 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 MMABQ96EY8 250 aaPredicted RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 MAGED4Q96JG8 741 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 CABS1Q96KC9 395 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 SPATA13Q96N96 652 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 SIGLEC12Q96PQ1 595 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 ALS2CR12Q96Q35 445 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 ZNF700Q9H0M5 742 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 SYNPO2LQ9H987 977 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 RIC8BQ9NVN3 520 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 IFNKQ9P0W0 207 aa9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 PRRC2AP48634 2157 aaKnown RBP9.6□□□□□ -0.87
NPLOC4-220ENST00000576940 CPAMD8Q8IZJ3 1885 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 LOC102723996A0A087X1L8 192 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 A0A1W2PPV9 198 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 H0YGG7 62 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 TTI1O43156 1089 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 METTL18O95568 372 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 ICAM2P13598 275 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CD99P14209 185 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CD1EP15812 388 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CD96P40200 585 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 SLC26A3P40879 764 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 EIF3EP60228 445 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 ARF3P61204 181 aaPredicted RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 MAT1AQ00266 395 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 FASTKQ14296 549 aaKnown RBP9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 TCEAL1Q15170 157 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 LONRF1Q17RB8 773 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 HKDC1Q2TB90 917 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 PRTGQ2VWP7 1150 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 CCDC38Q502W7 563 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 KCTD11Q693B1 232 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 LRRC8BQ6P9F7 803 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 TMEM205Q6UW68 189 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 DCUN1D3Q8IWE4 304 aa9.59□□□□□ -0.87
NPLOC4-220ENST00000576940 KRT222Q8N1A0 295 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms