RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CHST8Q9H2A9 424 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 SPNS1Q9H2V7 528 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 EPB41L4BQ9H329 900 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 ACTL8Q9H568 366 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 EURLQ9NYK6 297 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 TAS2R13Q9NYV9 303 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 NINJ2Q9NZG7 142 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 ZFATQ9P243 1243 aa8.32□□□□□ -1.08
SMG6-216ENST00000575176 TRMT6Q9UJA5 497 aaKnown RBP8.32□□□□□ -1.08
SMG6-216ENST00000575176 USP9XQ93008 2570 aaPredicted RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 SHANK1Q9Y566 2161 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 SCN3AQ9NY46 2000 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 TARM1B6A8C7 271 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 C21orf140B9A014 251 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 CDC7O00311 574 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 PFDN6O15212 129 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 ZSCAN9O15535 394 aaPredicted RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 CATP04040 527 aaKnown RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 DLSTP36957 453 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 MAGEA4P43358 317 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 CALCOCO2Q13137 446 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 LY6DQ14210 128 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 NCF4Q15080 339 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 KBTBD12Q3ZCT8 623 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 ICE2Q659A1 982 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 FBXO42Q6P3S6 717 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 UBE2R2Q712K3 238 aaPredicted RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 STRA8Q7Z7C7 330 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 TMEM126BQ8IUX1 230 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 KLHDC8AQ8IYD2 350 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 GPATCH11Q8N954 259 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 LSM14AQ8ND56 463 aaKnown RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 OR56A3Q8NH54 315 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 SMPDL3AQ92484 453 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 UBXN10Q96LJ8 280 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 OR2A5Q96R48 311 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 MESP1Q9BRJ9 268 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 TXLNGYQ9BZA5 131 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 RAB17Q9H0T7 212 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 ACTR5Q9H9F9 607 aaPredicted RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 L2HGDHQ9H9P8 463 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 CAB39LQ9H9S4 337 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 GPN2Q9H9Y4 310 aaPredicted RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 POPDC3Q9HBV1 291 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 FAM114A2Q9NRY5 505 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 DHCR7Q9UBM7 475 aaKnown RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 TAC3Q9UHF0 121 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 MTO1Q9Y2Z2 717 aaKnown RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 VWA7Q9Y334 891 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 MRPS2Q9Y399 296 aaKnown RBP8.31□□□□□ -1.08
SMG6-216ENST00000575176 COL12A1Q99715 3063 aa8.31□□□□□ -1.08
SMG6-216ENST00000575176 NPEPPSL1A6NEC2 478 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 ZNF891A8MT65 544 aaPredicted RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 E7EQ34 232 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 NDC80O14777 642 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 HAT1O14929 419 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SLC16A5O15375 505 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PRAMEF4O60810 478 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CREG1O75629 220 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 OR2B3O76000 313 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 RECKO95980 971 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 C8GP07360 202 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 UMODP07911 640 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 GSTA2P09210 222 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 RAB40ALP0C0E4 278 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 FAM87AP0C7U9 286 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SLC35E2BP0CK96 405 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 MYBL2P10244 700 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 EPORP19235 508 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 GCAP28676 217 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PTPN4P29074 926 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 MAGEA12P43365 314 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SLC6A12P48065 614 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CAV1Q03135 178 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 RELAQ04206 551 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PRDX1Q06830 199 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 UGT8Q16880 541 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 TMTC4Q5T4D3 741 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PRAMEF9Q5VWM5 478 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CPZQ66K79 652 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 LRRC8EQ6NSJ5 796 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 UGT3A1Q6NUS8 523 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CYB5D1Q6P9G0 228 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CMC1Q7Z7K0 106 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 MCATQ8IVS2 390 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 CENPLQ8N0S6 344 aaPredicted RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 ZNF655Q8N720 491 aaPredicted RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 FBF1Q8TES7 1133 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PYROXD1Q8WU10 500 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SKA2Q8WVK7 121 aaPredicted RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ISL2Q96A47 359 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SLC22A18Q96BI1 424 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PTERQ96BW5 349 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 FBXL8Q96CD0 374 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SPSB2Q99619 263 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms