RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PKMP14618 531 aaKnown RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 CHRM3P20309 590 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 COILP38432 576 aaPredicted RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 CCNFP41002 786 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 MAGEA3P43357 314 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 TIAL1Q01085 375 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHD3-214ENST00000572579 CTBP1Q13363 440 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 CYP1B1Q16678 543 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 EIF2S3LQ2VIR3 472 aaKnown RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 PRTGQ2VWP7 1150 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 TCTE1Q5JU00 501 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 TTC23LQ6PF05 361 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 CUZD1Q86UP6 607 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 HPS6Q86YV9 775 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 ARHGEF39Q8N4T4 335 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 CISD2Q8N5K1 135 aaKnown RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 CLEC1AQ8NC01 280 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 MCUQ8NE86 351 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 COG1Q8WTW3 980 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 SERPINB12Q96P63 405 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 DPH7Q9BTV6 452 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 RAB11FIP5Q9BXF6 653 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 WDR54Q9H977 334 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 ATP13A2Q9NQ11 1180 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 SLAMF7Q9NQ25 335 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 ZC3H7BQ9UGR2 993 aaKnown RBP17.3■□□□□ 0.36
CHD3-214ENST00000572579 ANKRD12Q6UB98 2062 aa17.3■□□□□ 0.36
CHD3-214ENST00000572579 H0YGG7 62 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 FKBP9O95302 570 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 CUL1Q13616 776 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 RNF187Q5TA31 235 aaPredicted RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 YOD1Q5VVQ6 348 aaPredicted RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 Q6ZS92 163 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 LAPTM4BQ86VI4 370 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 PAQR7Q86WK9 346 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 REXO1L1PQ8IX06 675 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 LRRC56Q8IYG6 542 aaPredicted RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 PPFIBP2Q8ND30 876 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 SIGLEC10Q96LC7 697 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 BARD1Q99728 777 aaKnown RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 FBXO6Q9NRD1 293 aaPredicted RBP17.29■□□□□ 0.36
CHD3-214ENST00000572579 ASF1BQ9NVP2 202 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 SPATA7Q9P0W8 599 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 CDC23Q9UJX2 597 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 NTNG1Q9Y2I2 539 aa17.29■□□□□ 0.36
CHD3-214ENST00000572579 SPTBN1Q01082 2364 aaKnown RBP17.28■□□□□ 0.36
CHD3-214ENST00000572579 SDR42E2A6NKP2 422 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 H3BMM5 538 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 KIF5CO60282 957 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 CBX6O95503 412 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 EIF2S1P05198 315 aaKnown RBP17.28■□□□□ 0.36
CHD3-214ENST00000572579 MLNP12872 115 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 PRAMEF13Q5VWM6 474 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ZNF470Q6ECI4 717 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ZNF425Q6IV72 752 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 CASC4Q6P4E1 433 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 NAT8LQ8N9F0 302 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 OR11G2Q8NGC1 345 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ZNF480Q8WV37 535 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ASB11Q8WXH4 323 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 NACC2Q96BF6 587 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ZNF669Q96BR6 464 aaPredicted RBP17.28■□□□□ 0.36
CHD3-214ENST00000572579 FOPNLQ96NB1 174 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 PLCD4Q9BRC7 762 aa17.28■□□□□ 0.36
CHD3-214ENST00000572579 ESPL1Q14674 2120 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 E7ENX8 843 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 GFYI3L273 518 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 FFAR3O14843 346 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 GPR42O15529 346 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 HAUS5O94927 633 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 SLC16A8O95907 504 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 EFNA3P52797 238 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 MPP1Q00013 466 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 TAP2Q03519 686 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 KLC1Q07866 573 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 AIMP2Q13155 320 aaKnown RBP17.27■□□□□ 0.36
CHD3-214ENST00000572579 HIF1AQ16665 826 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 FAM214AQ32MH5 1076 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 VWA2Q5GFL6 755 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 FHL5Q5TD97 284 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 ARMC3Q5W041 872 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 IGFL2Q6UWQ7 119 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 PARP9Q8IXQ6 854 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 PRSS58Q8IYP2 241 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 TTC29Q8NA56 475 aaPredicted RBP17.27■□□□□ 0.36
CHD3-214ENST00000572579 STT3BQ8TCJ2 826 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 SMPDL3AQ92484 453 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 OR2A5Q96R48 311 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 INTS10Q9NVR2 710 aaKnown RBP17.27■□□□□ 0.36
CHD3-214ENST00000572579 G3BP2Q9UN86 482 aaKnown RBP17.27■□□□□ 0.36
CHD3-214ENST00000572579 JRKLQ9Y4A0 524 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 PCDHGA10Q9Y5H3 936 aa17.27■□□□□ 0.36
CHD3-214ENST00000572579 IGLV3-12A0A075B6K2 115 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 MAGEB16A2A368 324 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 FOXS1O43638 330 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 USP1O94782 785 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms