RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC46A3Q7Z3Q1 461 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 SATL1Q86VE3 508 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 WDR49Q8IV35 697 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 NELFCDQ8IXH7 590 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 C12orf56Q8IXR9 622 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 MUC20Q8N307 709 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 ELMOD1Q8N336 334 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 CSGALNACT2Q8N6G5 542 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZNF441Q8N8Z8 693 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 XXYLT1Q8NBI6 393 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 POC1AQ8NBT0 407 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 VN1R2Q8NFZ6 395 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZNF461Q8TAF7 563 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 SPATA20Q8TB22 786 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 SCFD1Q8WVM8 642 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 FIG4Q92562 907 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 SMARCE1Q969G3 411 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 C18orf25Q96B23 403 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 SAAL1Q96ER3 474 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ANKRD36BP1Q96IX9 119 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 METTL2AQ96IZ6 378 aaKnown RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 TBATAQ96M53 351 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZNF560Q96MR9 790 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZMAT2Q96NC0 199 aaKnown RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 NR1H4Q96RI1 486 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 TSG101Q99816 390 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TKTL2Q9H0I9 626 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 AGPAT3Q9NRZ7 376 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 TUBGCP4Q9UGJ1 667 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ITGA11Q9UKX5 1188 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 BARX2Q9UMQ3 279 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 VDAC3Q9Y277 283 aa3.93□□□□□ -1.78
NUP88-202ENST00000570937 ZFP37Q9Y6Q3 630 aaPredicted RBP3.93□□□□□ -1.78
NUP88-202ENST00000570937 NLRC5Q86WI3 1866 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MYO9BQ13459 2157 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 A0A087WYN8 130 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 A0A1B0GVC2 190 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 BICDL2A1A5D9 508 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 GOLGA8IPA6NC78 632 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 GOLGA8JA6NMD2 632 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 KPNA7A9QM74 516 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 AKR1B15C9JRZ8 316 aaPredicted RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 I3L4J1 428 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 IFNL4K9M1U5 179 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 PIRO00625 290 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CYB561D2O14569 222 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 PSMA7O14818 248 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CETN3O15182 167 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CLIC2O15247 247 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MAPK13O15264 365 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 FGF19O95750 216 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 IGKV3-20P01619 116 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 NR3C1P04150 777 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 KRT19P08727 400 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 DLATP10515 647 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 KRT13P13646 458 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 P4HA1P13674 534 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 IL9P15248 144 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 EPCAMP16422 314 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TYMPP19971 482 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MCM3P25205 808 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CASP1P29466 404 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 HOXA9P31269 272 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 LHX1P48742 406 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TUFMP49411 452 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 TAF6P49848 677 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 ARPP19P56211 112 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 UBE2HP62256 183 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TSPY1Q01534 308 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 ENPEPQ07075 957 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 SPAG1Q07617 926 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 STK4Q13043 487 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 ZBTB17Q13105 803 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 GPR17Q13304 367 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MAPRE1Q15691 268 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 GSTA3Q16772 222 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 SGSM1Q2NKQ1 1148 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 PPM1LQ5SGD2 360 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 RARS2Q5T160 578 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 FAM69AQ5T7M9 428 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 ZNF658Q5TYW1 1059 aaPredicted RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 SLC8B1Q6J4K2 584 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 WDR73Q6P4I2 378 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 SLC39A4Q6P5W5 647 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 PRSS55Q6UWB4 352 aaPredicted RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 QSOX2Q6ZRP7 698 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 INTS8Q75QN2 995 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 DSELQ8IZU8 1212 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TMEM86AQ8N2M4 240 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 GUF1Q8N442 669 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 SPATA6LQ8N4H0 392 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 LRRC52Q8N7C0 313 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 LEMD2Q8NC56 503 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 SPATA18Q8TC71 538 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 C2orf15Q8WU43 125 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 SECTM1Q8WVN6 248 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 SYAP1Q96A49 352 aaPredicted RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 CCDC127Q96BQ5 260 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TMEM19Q96HH6 336 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 HES6Q96HZ4 224 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms