RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 MED13Q9UHV7 2174 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 KRT87PA6NCN2 255 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PABPN1LA6NDY0 278 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 KIF5CO60282 957 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CTSVO60911 334 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PHF2O75151 1096 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CNOT3O75175 753 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PSIP1O75475 530 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 SORBS2O94875 1100 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 MATN4O95460 622 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 UMODP07911 640 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ANXA5P08758 320 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 FBLP22087 321 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CXCR2P25025 360 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 MAGEA6P43360 314 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PNLIPRP1P54315 467 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 FOXL2P58012 376 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CTBP1Q13363 440 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 FASTKQ14296 549 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ARHGAP19Q14CB8 494 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 NKG7Q16617 165 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 LONRF1Q17RB8 773 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 AGAP7PQ5VUJ5 663 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ANKRD22Q5VYY1 191 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 FRMPD2BQ6IN97 320 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 UGT3A1Q6NUS8 523 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PRMT9Q6P2P2 845 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 TTC27Q6P3X3 843 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 NEK10Q6ZWH5 1172 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CENPUQ71F23 418 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 DENND6AQ8IWF6 608 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PARP9Q8IXQ6 854 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PALM2Q8IXS6 379 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PPIL6Q8IXY8 311 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 PRSS58Q8IYP2 241 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 RBMXL3Q8N7X1 1067 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 INPP5DQ92835 1189 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 MIEF2Q96C03 454 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 SERPINB12Q96P63 405 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 AGAP4Q96P64 663 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 CRB3Q9BUF7 120 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 SLC6A20Q9NP91 592 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 GALPQ9UBC7 116 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ZNF282Q9UDV7 671 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 ASIC3Q9UHC3 531 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 TAC3Q9UHF0 121 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 FBXL4Q9UKA2 621 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 B3GNT3Q9Y2A9 372 aa8.54□□□□□ -1.04
NPLOC4-204ENST00000570324 LOC105369274A0A096LPK9 316 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 LOC102723532A0A0G2JNH3 316 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 BLACEA4D250 179 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 OR2A25A4D2G3 310 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 FITM1A5D6W6 292 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 ARHGEF33A8MVX0 844 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 H0YGG7 62 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 MYO1CO00159 1063 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 MASP2O00187 686 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 SMAPO00193 183 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 TXNDC9O14530 226 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 MAP2K7O14733 419 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 MPC1LP0DKB6 136 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 GP1BBP13224 206 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 ENO3P13929 434 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 UQCRFS1P47985 274 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 GLRBP48167 497 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 RGS4P49798 205 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 CLCN7P51798 805 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 ARF3P61204 181 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 ABATP80404 500 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 CUL1Q13616 776 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PTK6Q13882 451 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PRR30Q53SZ7 412 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 HSP90AA5PQ58FG0 334 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PRAMEF13Q5VWM6 474 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 ICE2Q659A1 982 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 UBE2R2Q712K3 238 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 RNF44Q7L0R7 432 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PCGF5Q86SE9 256 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 REXO1L1PQ8IX06 675 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 OR4N4Q8N0Y3 316 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 SLC35F6Q8N357 371 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 CISD2Q8N5K1 135 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 CSNK1A1LQ8N752 337 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PPFIBP2Q8ND30 876 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 STT3BQ8TCJ2 826 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 KCNJ9Q92806 393 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 OSBPL9Q96SU4 736 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PKP4Q99569 1192 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 SPSB2Q99619 263 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 EBNA1BP2Q99848 306 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-204ENST00000570324 FAM167BQ9BTA0 163 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms