RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ANAPC2	Q9UJX6	822 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TLK1	Q9UKI8	766 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CHMP2B	Q9UQN3	213 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	NBAS	A2RRP1	2371 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784		E7ESA3	106 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	DSCR3	O14972	297 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PIM1	P11309	404 aa	Predicted RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	MCM3	P25205	808 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	RPL21	P46778	160 aa	Known RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PRDX1	Q06830	199 aa	Known RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	SSPN	Q14714	243 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	FAM214A	Q32MH5	1076 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	TEDDM1	Q5T9Z0	273 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	FAM69B	Q5VUD6	431 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	MLIP	Q5VWP3	458 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	ICE2	Q659A1	982 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	CPZ	Q66K79	652 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	SUSD1	Q6UWL2	747 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	TTLL10	Q6ZVT0	673 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	UBE2R2	Q712K3	238 aa	Predicted RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	MED25	Q71SY5	747 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PTRH1	Q86Y79	214 aa	Known RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	BBOF1	Q8ND07	529 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	OR2Y1	Q8NGV0	311 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PCSK5	Q92824	1860 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	FKBP10	Q96AY3	582 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	CFAP36	Q96G28	342 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PWWP2A	Q96N64	755 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	NDN	Q99608	321 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	ZFYVE21	Q9BQ24	234 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	DPH7	Q9BTV6	452 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	ACAT2	Q9BWD1	397 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	TRIM31	Q9BZY9	425 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	ING2	Q9H160	280 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	SLC6A20	Q9NP91	592 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	ACSS2	Q9NR19	701 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	CUTC	Q9NTM9	273 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	NDOR1	Q9UHB4	597 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	TP53TG5	Q9Y2B4	290 aa		13.26	□□□□□ -0.29
PKD1-231	ENST00000566784	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.26	□□□□□ -0.29
PKD1-231	ENST00000566784		A0A0J9YVX5	310 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	FAM187A	A6NFU0	413 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ARGFX	A6NJG6	315 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	NRP2	O60462	931 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	CNOT3	O75175	753 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	CEACAM4	O75871	244 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	DNAJB5	O75953	348 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	SYF2	O95926	243 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	C8G	P07360	202 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ITGAX	P20702	1163 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ALAS2	P22557	587 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	FOLR3	P41439	243 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	RRAD	P55042	308 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	CDKN2D	P55273	166 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	VSX2	P58304	361 aa	Predicted RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ETF1	P62495	437 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	YBX1	P67809	324 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ABAT	P80404	500 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	RELA	Q04206	551 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	SP140	Q13342	867 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	WASHC2D	Q5SRD0	308 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	RBM20	Q5T481	1227 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	FRMPD2B	Q6IN97	320 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	ZNF425	Q6IV72	752 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	TRMT10B	Q6PF06	316 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	MCOLN3	Q8TDD5	553 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	EEF1AKMT1	Q8WVE0	214 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	PLCD4	Q9BRC7	762 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	WDR54	Q9H977	334 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	PPAN	Q9NQ55	473 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	SLC22A11	Q9NSA0	550 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	UTP6	Q9NYH9	597 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	TAC3	Q9UHF0	121 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	PTRH2	Q9Y3E5	179 aa	Known RBP	13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	DOCK10	Q96BY6	2186 aa		13.25	□□□□□ -0.29
PKD1-231	ENST00000566784	LOC105369274	A0A096LPK9	316 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	IGKV1-8	A0A0C4DH67	115 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	LOC102723532	A0A0G2JNH3	316 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	SLC16A5	O15375	505 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	ALB	P02768	609 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	IMPA1	P29218	277 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	CASQ1	P31415	396 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	CASR	P41180	1078 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	EMP3	P54852	163 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	KLRB1	Q12918	225 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	PDIA2	Q13087	525 aa	Known RBP	13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	TSTA3	Q13630	321 aa	Predicted RBP	13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	ATP1A4	Q13733	1029 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	FBXO42	Q6P3S6	717 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	PAQR3	Q6TCH7	311 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	ASB18	Q6ZVZ8	466 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	MAATS1	Q7Z4T9	603 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	MRGPRE	Q86SM8	312 aa		13.24	□□□□□ -0.29
PKD1-231	ENST00000566784	PAQR7	Q86WK9	346 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms