RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TYRP1P17643 537 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 AMD1P17707 334 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 PRDX3P30048 256 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 CAPZBP47756 277 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 GLRBP48167 497 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 INSM1Q01101 510 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 FASTKQ14296 549 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 KIR2DS3Q14952 304 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 PLCL1Q15111 1095 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 NKAIN2Q5VXU1 208 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 SULT1C3Q6IMI6 304 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 AGTRAPQ6RW13 159 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 FAM47EQ6ZV65 393 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 USP53Q70EK8 1073 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 TMPRSS9Q7Z410 1059 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 C4orf33Q8N1A6 199 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 TEX9Q8N6V9 391 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 OR2A1Q8NGT9 310 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 OR56A3Q8NH54 315 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 TCP10LQ8TDR4 215 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 ATL1Q8WXF7 558 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 JPH3Q8WXH2 748 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 SMPDL3AQ92484 453 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 IL17FQ96PD4 163 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 OR2A14Q96R47 310 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 ABCG4Q9H172 646 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 MLXIPLQ9NP71 852 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 SPHK1Q9NYA1 384 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 UTP6Q9NYH9 597 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 EMCNQ9ULC0 261 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 RNF112Q9ULX5 631 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 PLAGL1Q9UM63 463 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 APOBEC2Q9Y235 224 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 PLLPQ9Y342 182 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 SPEGQ15772 3267 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 PIPSLA2A3N6 862 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 C2orf74A8MZ97 194 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 COPEO14579 308 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CAPN5O15484 640 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 DUX1O43812 170 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 ANP32DO95626 131 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 NPPBP16860 134 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 POLR2CP19387 275 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CALB2P22676 271 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 PEBP1P30086 187 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CSF2RBP32927 897 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 SLC6A12P48065 614 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 NOVA1P51513 510 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 KPNA2P52292 529 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 PUM1Q14671 1186 aaKnown RBP eCLIP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 METTL2BQ6P1Q9 378 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 MBOAT1Q6ZNC8 495 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 PLXDC1Q8IUK5 500 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CARFQ8N187 725 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 LMNTD1Q8N9Z9 388 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 OR4D9Q8NGE8 314 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 NCSTNQ92542 709 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 SLC22A18Q96BI1 424 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 SLC7A6OSQ96CW6 309 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 ZDHHC12Q96GR4 267 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 AHCYL2Q96HN2 611 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 TSNARE1Q96NA8 513 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 GFM1Q96RP9 751 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 SGPP1Q9BX95 441 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 IQCGQ9H095 443 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CXorf56Q9H5V9 222 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 DCLRE1BQ9H816 532 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 INTS7Q9NVH2 962 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 ACTR10Q9NZ32 417 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 NUDT4Q9NZJ9 180 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CIDEBQ9UHD4 219 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 ATXN7L1Q9ULK2 861 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 TMCO1Q9UM00 188 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 KLK4Q9Y5K2 254 aa12.18□□□□□ -0.46
SF3B3-206ENST00000565990 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
SF3B3-206ENST00000565990 G3V2L1 256 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 UBXN8O00124 270 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 PLIN3O60664 434 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 FKBP9O95302 570 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 GUCA1CO95843 209 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 PROCP04070 461 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ARFIP2P53365 341 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ALDH18A1P54886 795 aaKnown RBP12.17□□□□□ -0.46
SF3B3-206ENST00000565990 SIM1P81133 766 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-206ENST00000565990 PRDX1Q06830 199 aaKnown RBP12.17□□□□□ -0.46
SF3B3-206ENST00000565990 PCDH1Q08174 1060 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ZRSR2Q15696 482 aaKnown RBP12.17□□□□□ -0.46
SF3B3-206ENST00000565990 AMZ1Q400G9 498 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 ARHGAP22Q7Z5H3 698 aa12.17□□□□□ -0.46
SF3B3-206ENST00000565990 CLNKQ7Z7G1 428 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms