RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CD1CP29017 333 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ARL4DP49703 201 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CCR8P51685 355 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CDH13P55290 713 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CCL7P80098 99 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 IRF8Q02556 426 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 LCP2Q13094 533 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 SQSTM1Q13501 440 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 LAPTM5Q13571 262 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 SPIDRQ14159 915 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 HIST2H2ACQ16777 129 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 SLC5A12Q1EHB4 618 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CCDC157Q569K6 752 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PAGE2BQ5JRK9 111 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PERM1Q5SV97 790 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ICE2Q659A1 982 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 HIST2H2AA3Q6FI13 130 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 TMEM71Q6P5X7 295 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 WDR74Q6RFH5 385 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 SPESP1Q6UW49 350 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 NXPE4Q6UWF7 544 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ZCCHC23Q6ZST2 131 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 GOLGA7Q7Z5G4 137 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ADCK2Q7Z695 626 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 MILR1Q7Z6M3 343 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PIP4P1Q86T03 277 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 TMPRSS11BQ86T26 416 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 KIRREL3Q8IZU9 778 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 KRT78Q8N1N4 520 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 AFAP1L2Q8N4X5 818 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 LMNTD1Q8N9Z9 388 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 DEFB124Q8NES8 71 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 OR2L3Q8NG85 312 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 OR2A1Q8NGT9 310 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 BAHD1Q8TBE0 780 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 TRPC4APQ8TEL6 797 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ZNF483Q8TF39 744 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 CKAP2Q8WWK9 683 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 UBE2E3Q969T4 207 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ZUFSPQ96AP4 578 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 MAGEB18Q96M61 343 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 OR2A14Q96R47 310 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 GFM1Q96RP9 751 aaKnown RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 NRTNQ99748 197 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 ACTR8Q9H981 624 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 SEMA4BQ9NPR2 832 aaPredicted RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PCTPQ9UKL6 214 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 POMT2Q9UKY4 750 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 CDV3Q9UKY7 258 aaKnown RBP7.51□□□□□ -1.21
CDH1-208ENST00000565810 SNX7Q9UNH6 387 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PCDHGA1Q9Y5H4 931 aa7.51□□□□□ -1.21
CDH1-208ENST00000565810 PCDH15Q96QU1 1955 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 TLCD2A6NGC4 264 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 LRRC14BA6NHZ5 514 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 TMX2-CTNND1H3BSU7 103 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 H7BY64 318 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 SLC30A4O14863 429 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 HGSO14964 777 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 POLR3GO15318 223 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 PRICKLE3O43900 615 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 UGDHO60701 494 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 CLDN9O95484 217 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 EBLN1P0CF75 366 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 C1GALT1C1LP0DN25 315 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 TSPAN8P19075 237 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 PSMB5P28074 263 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 PEBP1P30086 187 aaKnown RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 MDH1P40925 334 aaKnown RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 HNF4AP41235 474 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 SLC1A6P48664 564 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ACADVLP49748 655 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 PKNOX1P55347 436 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ABCE1P61221 599 aaKnown RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 GALNT1Q10472 559 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 CHIT1Q13231 466 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 RCN2Q14257 317 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 TBCCQ15814 346 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ZXDCQ2QGD7 858 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 TUBB8Q3ZCM7 444 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 XKR6Q5GH73 641 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 SNAP47Q5SQN1 464 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 CACHD1Q5VU97 1274 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 LIPJQ5W064 366 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ATG9BQ674R7 924 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 FIGLAQ6QHK4 219 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 FAM92BQ6ZTR7 304 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 FRMD7Q6ZUT3 714 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 GLRX5Q86SX6 157 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 MYLK4Q86YV6 388 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 CARFQ8N187 725 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 OR4D9Q8NGE8 314 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ZNF75CPQ92670 426 aaPredicted RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 NEIL2Q969S2 332 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 PTCD3Q96EY7 689 aaKnown RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 PRAP1Q96NZ9 151 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 NSUN5Q96P11 429 aaKnown RBP7.5□□□□□ -1.21
CDH1-208ENST00000565810 OR4K3Q96R72 315 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 ZNF382Q96SR6 550 aa7.5□□□□□ -1.21
CDH1-208ENST00000565810 AIF1LQ9BQI0 150 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms