RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TSTA3Q13630 321 aaPredicted RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 ARHGAP19Q14CB8 494 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 NKG7Q16617 165 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 PRR30Q53SZ7 412 aaPredicted RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 HSP90AA5PQ58FG0 334 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 VWA5B1Q5TIE3 1220 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 SLC6A19Q695T7 634 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 JMJD6Q6NYC1 403 aaPredicted RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 SHISA6Q6ZSJ9 500 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 NEK10Q6ZWH5 1172 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 OVCH1Q7RTY7 1134 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 PPIL6Q8IXY8 311 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 GALNT16Q8N428 558 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 TTC29Q8NA56 475 aaPredicted RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 PPFIBP2Q8ND30 876 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CPT1CQ8TCG5 803 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CD200R1Q8TD46 325 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF480Q8WV37 535 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 SMPDL3AQ92484 453 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 GPR21Q99679 349 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 ZFYVE21Q9BQ24 234 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 DDX47Q9H0S4 455 aaKnown RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 SLC26A1Q9H2B4 701 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CCDC68Q9H2F9 335 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 WDR54Q9H977 334 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 FAM114A2Q9NRY5 505 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 C20orf96Q9NUD7 363 aaPredicted RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 TAC3Q9UHF0 121 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 FBXO5Q9UKT4 447 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 MAU2Q9Y6X3 613 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 FAM169AQ9Y6X4 670 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 NUP210LQ5VU65 1888 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 FLNCQ14315 2725 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 SHANK1Q9Y566 2161 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 HYKKA2RU49 373 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 USP27XA6NNY8 438 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 AGPSO00116 658 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CES2O00748 559 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 SOCS6O14544 535 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ZSCAN12O43309 604 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 SRPX2O60687 465 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 HAUS5O94927 633 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 SLC16A8O95907 504 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ALBP02768 609 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 EIF2S1P05198 315 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PGAM1P18669 254 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MMP11P24347 488 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 RPA3P35244 121 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PNLIPRP1P54315 467 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 TIAL1Q01085 375 aaKnown RBP eCLIP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CRYMQ14894 314 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MYBPC3Q14896 1274 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PPP1R7Q15435 360 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 INPP5JQ15735 1006 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PRTGQ2VWP7 1150 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 TTLL9Q3SXZ7 439 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MSS51Q4VC12 460 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 FBXO42Q6P3S6 717 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CYHR1Q6ZMK1 362 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PIWIL4Q7Z3Z4 852 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 KCNMB4Q86W47 210 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ATCAYQ86WG3 371 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 HPS6Q86YV9 775 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 LMNTD2Q8IXW0 634 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 LRRC56Q8IYG6 542 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CPNE9Q8IYJ1 553 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CLEC1AQ8NC01 280 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CALML6Q8TD86 181 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ASB11Q8WXH4 323 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 C10orf90Q96M02 699 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 PLCD4Q9BRC7 762 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MESP1Q9BRJ9 268 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 FAM167BQ9BTA0 163 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 AARSD1Q9BTE6 412 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 SOX17Q9H6I2 414 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ZNF552Q9H707 407 aaPredicted RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MRPS30Q9NP92 439 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 IARS2Q9NSE4 1012 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 KLHL42Q9P2K6 505 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ZC3H7BQ9UGR2 993 aaKnown RBP9.58□□□□□ -0.88
CMTM3-209ENST00000565003 ASIC3Q9UHC3 531 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 CDC23Q9UJX2 597 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 FBXL4Q9UKA2 621 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 DHRS7Q9Y394 339 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 MAP4K5Q9Y4K4 846 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 HS3ST3B1Q9Y662 390 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 LRRK2Q5S007 2527 aa9.58□□□□□ -0.88
CMTM3-209ENST00000565003 HEATR5BQ9P2D3 2071 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 VSTM2BA6NLU5 285 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 E7ENX8 843 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 H0YGG7 62 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 GFYI3L273 518 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 SMAPO00193 183 aa9.57□□□□□ -0.88
CMTM3-209ENST00000565003 DNALI1O14645 258 aaPredicted RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 SYF2O95926 243 aaKnown RBP9.57□□□□□ -0.88
CMTM3-209ENST00000565003 IGHEP01854 428 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms