RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 NDRG2Q9UN36 371 aaKnown RBP24.39■■□□□ 1.5
LINC01003-201ENST00000564834 LRRC72A6NJI9 287 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 ACOT8O14734 319 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 ANPEPP15144 967 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 TCN1P20061 433 aaPredicted RBP24.39■■□□□ 1.49
LINC01003-201ENST00000564834 MSX2P35548 267 aaPredicted RBP24.39■■□□□ 1.49
LINC01003-201ENST00000564834 HSD17B2P37059 387 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 SESN3P58005 492 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 KIAA1024LP59773 190 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 ATG9BQ674R7 924 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 TBC1D21Q8IYX1 336 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 HIPK4Q8NE63 616 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 PYDC1Q8WXC3 89 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 EFCAB11Q9BUY7 163 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 TRIT1Q9H3H1 467 aaKnown RBP24.39■■□□□ 1.49
LINC01003-201ENST00000564834 OSGEPL1Q9H4B0 414 aa24.39■■□□□ 1.49
LINC01003-201ENST00000564834 TDRKHQ9Y2W6 561 aaKnown RBP24.39■■□□□ 1.49
LINC01003-201ENST00000564834 PRR19A6NJB7 356 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 MAN2B1O00754 1011 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 MAP3K7O43318 606 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 AMD1P17707 334 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 SLC6A2P23975 617 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 C10orf62Q5T681 223 aaPredicted RBP24.38■■□□□ 1.49
LINC01003-201ENST00000564834 MED27Q6P2C8 311 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 FAM156AQ8NDB6 213 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 REPS1Q96D71 796 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 APIPQ96GX9 242 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 METTL2AQ96IZ6 378 aaKnown RBP24.38■■□□□ 1.49
LINC01003-201ENST00000564834 FCRL1Q96LA6 429 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 VPS29Q9UBQ0 182 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 DLGAP4Q9Y2H0 992 aa24.38■■□□□ 1.49
LINC01003-201ENST00000564834 CFAP20Q9Y6A4 193 aaKnown RBP24.38■■□□□ 1.49
LINC01003-201ENST00000564834 POM121BA6NF01 834 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SOX1O00570 391 aaPredicted RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 CAPRIN1Q14444 709 aaKnown RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SPATS1Q496A3 300 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 PAGE2BQ5JRK9 111 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 PRAMEF14Q5SWL7 426 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 PRAMEF13Q5VWM6 474 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 LCTLQ6UWM7 567 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SLC15A3Q8IY34 581 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 OR7G3Q8NG95 312 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 HMGB4Q8WW32 186 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SLC5A11Q8WWX8 675 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 IL17FQ96PD4 163 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 MTERF1Q99551 399 aaKnown RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 CLMPQ9H6B4 373 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SPATA7Q9P0W8 599 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 MOSPD1Q9UJG1 213 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 PLAGL1Q9UM63 463 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 SH2B3Q9UQQ2 575 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 ZNF839A8K0R7 811 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 FPGTO14772 594 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 C1GALT1C1LP0DN25 315 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 TRAP1Q12931 704 aaKnown RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 MLF2Q15773 248 aaPredicted RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 CATSPEREQ5SY80 951 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 PRR23BQ6ZRT6 265 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 RNF175Q8N4F7 328 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 HAUS8Q9BT25 410 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 POLMQ9NP87 494 aaPredicted RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 USP36Q9P275 1121 aaKnown RBP24.37■■□□□ 1.49
LINC01003-201ENST00000564834 KCNK6Q9Y257 313 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 WDR37Q9Y2I8 494 aa24.37■■□□□ 1.49
LINC01003-201ENST00000564834 NME4O00746 187 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 IL6P05231 212 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 HNRNPA2B1P22626 353 aaKnown RBP24.36■■□□□ 1.49
LINC01003-201ENST00000564834 CLDN8P56748 225 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 DDX39BQ13838 428 aaKnown RBP24.36■■□□□ 1.49
LINC01003-201ENST00000564834 CYP2A13Q16696 494 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 THEMIS2Q5TEJ8 643 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 LMNTD1Q8N9Z9 388 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 BHLHE22Q8NFJ8 381 aaPredicted RBP24.36■■□□□ 1.49
LINC01003-201ENST00000564834 HLA-CQ95604 372 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 APOLD1Q96LR9 279 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 C12orf66Q96MD2 445 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 MENTQ9BUN1 341 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 FGF22Q9HCT0 170 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 GPSM3Q9Y4H4 160 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 PCDHA9Q9Y5H5 950 aa24.36■■□□□ 1.49
LINC01003-201ENST00000564834 PRSS38A1L453 326 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 LATO43561 262 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 SDC1P18827 310 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 DGKQP52824 942 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 CLNS1AP54105 237 aaKnown RBP24.35■■□□□ 1.49
LINC01003-201ENST00000564834 CLDN2P57739 230 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 SLBPQ14493 270 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC01003-201ENST00000564834 FAM174BQ3ZCQ3 159 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 SLC2A7Q6PXP3 512 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 NXPE4Q6UWF7 544 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 ZNF852Q6ZMS4 543 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 LRRC74BQ6ZQY2 392 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 Q6ZS52 159 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 DHDDSQ86SQ9 333 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 HUS1BQ8NHY5 278 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 SLC13A3Q8WWT9 602 aa24.35■■□□□ 1.49
LINC01003-201ENST00000564834 GEMIN8Q9NWZ8 242 aaKnown RBP24.35■■□□□ 1.49
LINC01003-201ENST00000564834 C15orf38-AP3S2A0A0A6YYH1 394 aa24.34■■□□□ 1.49
LINC01003-201ENST00000564834 MAGEB17A8MXT2 336 aa24.34■■□□□ 1.49
LINC01003-201ENST00000564834 PCNAP12004 261 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms