RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SSC4DQ8WTU2 575 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 LMF1Q96S06 567 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 SPSB2Q99619 263 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 BARD1Q99728 777 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 MIPEPQ99797 713 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 ZFYVE21Q9BQ24 234 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 ZNF282Q9UDV7 671 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 FBXL4Q9UKA2 621 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 CRYL1Q9Y2S2 319 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 JRKLQ9Y4A0 524 aa11.65□□□□□ -0.54
GTF3C1-204ENST00000564664 TCRBV7S3A2A0A539 114 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 EIF3FO00303 357 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 SOCS6O14544 535 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 HRH2P25021 359 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ITGA3P26006 1051 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 RPA3P35244 121 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 BDKRB1P46663 353 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 UQCRFS1P47985 274 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CLCN7P51798 805 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 PRDX1Q06830 199 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 RAPSNQ13702 412 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 THOC5Q13769 683 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 DHX34Q14147 1143 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 PRTGQ2VWP7 1150 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 KLHL38Q2WGJ6 581 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CCSMST1Q4G0I0 132 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CRB2Q5IJ48 1285 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 KIRREL2Q6UWL6 708 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CES3Q6UWW8 571 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CENPUQ71F23 418 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 COX15Q7KZN9 410 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 RASGEF1CQ8N431 466 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 GABPB2Q8TAK5 448 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 KCNJ9Q92806 393 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 MAGOHBQ96A72 148 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 SNRNP40Q96DI7 357 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 EBNA1BP2Q99848 306 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 PLCD4Q9BRC7 762 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 DPH7Q9BTV6 452 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 LHPPQ9H008 270 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CCDC68Q9H2F9 335 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 SLC6A20Q9NP91 592 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 MRPS30Q9NP92 439 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ZC3H7BQ9UGR2 993 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 CIDEBQ9UHD4 219 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 HS3ST3B1Q9Y662 390 aa11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 COPG1Q9Y678 874 aaKnown RBP11.64□□□□□ -0.55
GTF3C1-204ENST00000564664 ICE1Q9Y2F5 2266 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 A0A0J9YVX5 310 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 CTAGE9A4FU28 777 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ARHGEF33A8MVX0 844 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 GOLGA8KD6RF30 607 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 GOLGA8TH3BQL2 631 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ZBTB14O43829 449 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 NIPSNAP2O75323 286 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 AVILO75366 819 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 USP1O94782 785 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 CBX6O95503 412 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ZGLP1P0C6A0 271 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 MPC1LP0DKB6 136 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 FDXRP22570 491 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 MCM3P25205 808 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 CXCR5P32302 372 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 OR1D4P47884 311 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 RBBP7Q16576 425 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 CYP1B1Q16678 543 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 TUBB8Q3ZCM7 444 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ACSBG2Q5FVE4 666 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ATG9BQ674R7 924 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 CISD2Q8N5K1 135 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 STT3BQ8TCJ2 826 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 GRK7Q8WTQ7 553 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 ASB11Q8WXH4 323 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 INPP5DQ92835 1189 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 MIEF2Q96C03 454 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 WDR77Q9BQA1 342 aaPredicted RBP11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 MAP10Q9P2G4 905 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 PPP2R2CQ9Y2T4 447 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 DHRS7Q9Y394 339 aa11.63□□□□□ -0.55
GTF3C1-204ENST00000564664 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PCSK5Q92824 1860 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 LOC105369274A0A096LPK9 316 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 LOC102723532A0A0G2JNH3 316 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 ZCWPW2A0A1B0GU75 182 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 H0YGG7 62 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 GFYI3L273 518 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 HPP00738 406 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 EIF2S1P05198 315 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 EZRP15311 586 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PSMB5P28074 263 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 COILP38432 576 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 SKIV2L2P42285 1042 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 ARF3P61204 181 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms