RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TPSAB1Q15661 275 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 RBBP7Q16576 425 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 LDLRAP1Q5SW96 308 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 DENND5AQ6IQ26 1287 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 OVCH1Q7RTY7 1134 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 PCGF5Q86SE9 256 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 HOOK3Q86VS8 718 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 SPPL2CQ8IUH8 684 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 FAM20CQ8IXL6 584 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 CEP112Q8N8E3 955 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 BLOC1S5Q8TDH9 187 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 RMDN2Q96LZ7 410 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 WDR54Q9H977 334 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A7Q9HAW7 530 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A10Q9HAW8 530 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 UGT1A8Q9HAW9 530 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 ZNF160Q9HCG1 818 aa15.23■□□□□ 0.03
RNF40-205ENST00000563909 FBN1P35555 2871 aaKnown RBP15.22■□□□□ 0.03
RNF40-205ENST00000563909 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 KIAA1324LA8MWY0 1029 aaPredicted RBP15.22■□□□□ 0.03
RNF40-205ENST00000563909 C2orf74A8MZ97 194 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 TTI1O43156 1089 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 GPR39O43194 453 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 POLBP06746 335 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 CTAGE8P0CG41 777 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 SPAM1P38567 509 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 MAGEA6P43360 314 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 PMP22Q01453 160 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 NKG7Q16617 165 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 TLDC1Q6P9B6 456 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 FAM151BQ6UXP7 276 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 GLT6D1Q7Z4J2 308 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 CTAGE6Q86UF2 777 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 CTAGE4Q8IX94 777 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 KBTBD2Q8IY47 623 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 C19orf47Q8N9M1 422 aaKnown RBP15.22■□□□□ 0.03
RNF40-205ENST00000563909 DNAAF3Q8N9W5 541 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 DDHD1Q8NEL9 900 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 OR52K1Q8NGK4 314 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 SPATA3Q8NHX4 192 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 DTX3LQ8TDB6 740 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 FKBP10Q96AY3 582 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 SPSB2Q99619 263 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 ZNF559Q9BR84 538 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 MESP1Q9BRJ9 268 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 SOX17Q9H6I2 414 aaPredicted RBP15.22■□□□□ 0.03
RNF40-205ENST00000563909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
RNF40-205ENST00000563909 ZNF835Q9Y2P0 537 aa15.22■□□□□ 0.03
RNF40-205ENST00000563909 NDC80O14777 642 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 PRAMEF2O60811 474 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 USP1O94782 785 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 CRTAMO95727 393 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 ITGAXP20702 1163 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 SOX11P35716 441 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 GABRA4P48169 554 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 FOLH1Q04609 750 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 KCNJ11Q14654 390 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
RNF40-205ENST00000563909 CEBPEQ15744 281 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 ZIC1Q15915 447 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.03
RNF40-205ENST00000563909 GPRC6AQ5T6X5 926 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 DET1Q7L5Y6 550 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 TRIM73Q86UV7 250 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 PPIL6Q8IXY8 311 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 SUN3Q8TAQ9 357 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 BRIX1Q8TDN6 353 aaKnown RBP15.21■□□□□ 0.03
RNF40-205ENST00000563909 PSMF1Q92530 271 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 SDCCAG3Q96C92 435 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 FERD3LQ96RJ6 166 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 SMR3AQ99954 134 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 ACTR10Q9NZ32 417 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 MRPS2Q9Y399 296 aaKnown RBP15.21■□□□□ 0.03
RNF40-205ENST00000563909 HEBP2Q9Y5Z4 205 aa15.21■□□□□ 0.03
RNF40-205ENST00000563909 CSPG4Q6UVK1 2322 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 GLYATL1P3A0A0U1RQE8 302 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 FOXO6A8MYZ6 492 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 DNALI1O14645 258 aaPredicted RBP15.2■□□□□ 0.02
RNF40-205ENST00000563909 HPP00738 406 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 ALBP02768 609 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 TERF1P54274 439 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 MSLNQ13421 630 aaPredicted RBP15.2■□□□□ 0.02
RNF40-205ENST00000563909 ITGA9Q13797 1035 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 LRRC8BQ6P9F7 803 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 SPESP1Q6UW49 350 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 Q6ZPB1 254 aaPredicted RBP15.2■□□□□ 0.02
RNF40-205ENST00000563909 TTLL10Q6ZVT0 673 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 BIVMQ86UB2 503 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 AMIGO1Q86WK6 493 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 PRIMA1Q86XR5 153 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 CFAP206Q8IYR0 622 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 SIRT6Q8N6T7 355 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 MCUQ8NE86 351 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 OR2L2Q8NH16 312 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 NINJ1Q92982 152 aa15.2■□□□□ 0.02
RNF40-205ENST00000563909 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.2■□□□□ 0.02
RNF40-205ENST00000563909 TRIM51Q9BSJ1 452 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms