RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RXRGP48443 463 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 CLK3P49761 638 aaKnown RBP12.72□□□□□ -0.37
USB1-207ENST00000563149 C21orf58P58505 322 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 VEZF1Q14119 521 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 OXA1LQ15070 435 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 TRIM16LQ309B1 348 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 PLEKHS1Q5SXH7 462 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 CBLL1Q75N03 491 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 SLCO6A1Q86UG4 719 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 GPR26Q8NDV2 337 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 TSSK3Q96PN8 268 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 ASPSCR1Q9BZE9 553 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 EPS8L2Q9H6S3 715 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 ANKHQ9HCJ1 492 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 ABCB8Q9NUT2 735 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 FAM120CQ9NX05 1096 aaKnown RBP12.72□□□□□ -0.37
USB1-207ENST00000563149 GPRC5BQ9NZH0 403 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
USB1-207ENST00000563149 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 CPQQ9Y646 472 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 U3KQV3 271 aa12.72□□□□□ -0.37
USB1-207ENST00000563149 A0A1W2PQ45 241 aaPredicted RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 A0A1W2PQY0 241 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 BOLA2-SMG1P6H3BVE0 249 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 CLIC1O00299 241 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 KPNA5O15131 536 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 SMAD6O43541 496 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 XPNPEP2O43895 674 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 GREM1O60565 184 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 XYLBO75191 536 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 SERPINB7O75635 380 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 EPN2O95208 641 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ZNF682O95780 498 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 NTRK1P04629 796 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 CYP2A7P20853 494 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 AOAHP28039 575 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 CCR7P32248 378 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 IDUAP35475 653 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 ST13P50502 369 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 AP1S2P56377 157 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 CSTF3Q12996 717 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 GTF2H3Q13889 308 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 KCNC3Q14003 757 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 GPNMBQ14956 572 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 LIPJQ5W064 366 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 OR4F3Q6IEY1 312 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 NOXRED1Q6NXP6 359 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 MBOAT1Q6ZNC8 495 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 PRSS48Q7RTY5 328 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 P2RY8Q86VZ1 359 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 HORMAD1Q86X24 394 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ZZZ3Q8IYH5 903 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ADGRG2Q8IZP9 1017 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 APCDD1Q8J025 514 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 TTC29Q8NA56 475 aaPredicted RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 WFDC5Q8TCV5 224 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 ASB11Q8WXH4 323 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 SCRN2Q96FV2 425 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ALPK1Q96QP1 1244 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 PITX2Q99697 317 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 CLSTN3Q9BQT9 956 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 NEURL2Q9BR09 285 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 RIBC2Q9H4K1 309 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 DNAJC11Q9NVH1 559 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 KIAA1522Q9P206 1035 aaPredicted RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 ERVK-18Q9QC07 812 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
USB1-207ENST00000563149 DGKBQ9Y6T7 804 aa12.71□□□□□ -0.37
USB1-207ENST00000563149 ANAPC1Q9H1A4 1944 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 E9PQ18 207 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 FPGTO14772 594 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 RGS10O43665 173 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 MITFO75030 526 aaPredicted RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 KCNK5O95279 499 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 JUPP14923 745 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 EFNA1P20827 205 aaPredicted RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 PPIBP23284 216 aaKnown RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 TACR1P25103 407 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 CD6P30203 668 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 FADDQ13158 208 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 CLCA4Q14CN2 919 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 MPP7Q5T2T1 576 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 KIAA1614Q5VZ46 1190 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 FRG2Q64ET8 278 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 ZCCHC8Q6NZY4 707 aaKnown RBP12.71□□□□□ -0.38
USB1-207ENST00000563149 NEK5Q6P3R8 708 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 USP45Q70EL2 814 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 CEP68Q76N32 757 aa12.71□□□□□ -0.38
USB1-207ENST00000563149 GPR155Q7Z3F1 870 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms