RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 PAPD7Q5XG87 772 aaKnown RBP16.13■□□□□ 0.17
CLK3-210ENST00000563112 LRRC8EQ6NSJ5 796 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 SUSD1Q6UWL2 747 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 OVCH1Q7RTY7 1134 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 HPS6Q86YV9 775 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 ASB11Q8WXH4 323 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 SLC30A3Q99726 388 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 NAPGQ99747 312 aaPredicted RBP16.13■□□□□ 0.17
CLK3-210ENST00000563112 ENAMQ9NRM1 1142 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 GPR83Q9NYM4 423 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 ANKMY1Q9P2S6 941 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 ZC3H7BQ9UGR2 993 aaKnown RBP16.13■□□□□ 0.17
CLK3-210ENST00000563112 TRMT6Q9UJA5 497 aaKnown RBP16.13■□□□□ 0.17
CLK3-210ENST00000563112 SAR1BQ9Y6B6 198 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 ANKRD12Q6UB98 2062 aa16.13■□□□□ 0.17
CLK3-210ENST00000563112 PRRC2CQ9Y520 2896 aaKnown RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 HYKKA2RU49 373 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 OR2A25A4D2G3 310 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 FITM1A5D6W6 292 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 USP27XA6NNY8 438 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 SMAPO00193 183 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 EIF3FO00303 357 aaPredicted RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 DPM1O60762 260 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 ONECUT2O95948 504 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 EIF2S1P05198 315 aaKnown RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 SKIV2L2P42285 1042 aaKnown RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 RGS4P49798 205 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 FOXK1P85037 733 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 COLEC12Q5KU26 742 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 RNF44Q7L0R7 432 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 KLHL7Q8IXQ5 586 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 PDIK1LQ8N165 341 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 CLEC1AQ8NC01 280 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 C2CD4AQ8NCU7 369 aaPredicted RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 CD200R1Q8TD46 325 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 NACC2Q96BF6 587 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 ZFYVE21Q9BQ24 234 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 AARSD1Q9BTE6 412 aaKnown RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 WDR54Q9H977 334 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 SLC22A11Q9NSA0 550 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 TAC3Q9UHF0 121 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 NXT1Q9UKK6 140 aaKnown RBP16.12■□□□□ 0.17
CLK3-210ENST00000563112 MED16Q9Y2X0 877 aa16.12■□□□□ 0.17
CLK3-210ENST00000563112 TNRC6AQ8NDV7 1962 aaKnown RBP16.11■□□□□ 0.17
CLK3-210ENST00000563112 GFYI3L273 518 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 CNOT3O75175 753 aaKnown RBP16.11■□□□□ 0.17
CLK3-210ENST00000563112 SLC16A8O95907 504 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 ABATP80404 500 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 DR1Q01658 176 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 PRDX1Q06830 199 aaKnown RBP16.11■□□□□ 0.17
CLK3-210ENST00000563112 MORF4L2Q15014 288 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 IGFBP7Q16270 282 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 MUM1Q2TAK8 710 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 DCAF10Q5QP82 559 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 THEMIS2Q5TEJ8 643 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 ICE2Q659A1 982 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 FRMPD2BQ6IN97 320 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 FBXO42Q6P3S6 717 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 CYHR1Q6ZMK1 362 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 KIAA0408Q6ZU52 694 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 UBE2R2Q712K3 238 aaPredicted RBP16.11■□□□□ 0.17
CLK3-210ENST00000563112 ATCAYQ86WG3 371 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 CREG2Q8IUH2 290 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 CPNE9Q8IYJ1 553 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 FDCSPQ8NFU4 85 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 ZNF480Q8WV37 535 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 COL26A1Q96A83 441 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 VPS50Q96JG6 964 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 SLC26A1Q9H2B4 701 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 SLC6A20Q9NP91 592 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 PPANQ9NQ55 473 aaKnown RBP16.11■□□□□ 0.17
CLK3-210ENST00000563112 ABCF3Q9NUQ8 709 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 P4HTMQ9NXG6 502 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 TAS2R13Q9NYV9 303 aa16.11■□□□□ 0.17
CLK3-210ENST00000563112 LOC105369274A0A096LPK9 316 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 LOC102723532A0A0G2JNH3 316 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 TTLL8A6PVC2 850 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 E7ENX8 843 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 CCDC188H7C350 402 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 BANF1O75531 89 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 ITGAXP20702 1163 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 CARSP49589 748 aaKnown RBP16.1■□□□□ 0.17
CLK3-210ENST00000563112 TAP2Q03519 686 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 NKG7Q16617 165 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 MSS51Q4VC12 460 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 PRMT9Q6P2P2 845 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 PIWIL4Q7Z3Z4 852 aaKnown RBP16.1■□□□□ 0.17
CLK3-210ENST00000563112 PPP1R32Q7Z5V6 425 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 OR4N4Q8N0Y3 316 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 PLCD4Q9BRC7 762 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 NUDT9Q9BW91 350 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 ZNF304Q9HCX3 659 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 ATP13A2Q9NQ11 1180 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 C5AR2Q9P296 337 aa16.1■□□□□ 0.17
CLK3-210ENST00000563112 RNF14Q9UBS8 474 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms