RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SH3KBP1Q96B97 665 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 IL17FQ96PD4 163 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PITHD1Q9GZP4 211 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 POT1Q9NUX5 634 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TMEM45AQ9NWC5 275 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 SCHIP1Q9P0W5 487 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TAAR2Q9P1P5 351 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PTGDR2Q9Y5Y4 395 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 THADAQ6YHU6 1953 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PCM1Q15154 2024 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TECTAO75443 2155 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 NPIPB8E9PQR5 432 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 DNAJC8O75937 253 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-205ENST00000562310 RSL1D1O76021 490 aaKnown RBP13.8□□□□□ -0.2
COMMD4-205ENST00000562310 C1GALT1C1LP0DN25 315 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 PRPH2P23942 346 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 PIK3R1P27986 724 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 AFF3P51826 1226 aaKnown RBP13.8□□□□□ -0.2
COMMD4-205ENST00000562310 C21orf59P57076 290 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 NXPH1P58417 271 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 PHEXP78562 749 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 GRIK2Q13002 908 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 FASTKQ14296 549 aaKnown RBP13.8□□□□□ -0.2
COMMD4-205ENST00000562310 NAA25Q14CX7 972 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 TEAD4Q15561 434 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 MED27Q6P2C8 311 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 NXPE4Q6UWF7 544 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 RBM12BQ8IXT5 1001 aaKnown RBP13.8□□□□□ -0.2
COMMD4-205ENST00000562310 TMEFF1Q8IYR6 380 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 SDR16C5Q8N3Y7 309 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 OR2T11Q8NH01 316 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 CCL4L1Q8NHW4 92 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 GAB3Q8WWW8 586 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 LRRC61Q9BV99 259 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 LRMDAQ9H2I8 198 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 BRF2Q9HAW0 419 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 OR6C2Q9NZP2 312 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 ICKQ9UPZ9 632 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 TSC22D4Q9Y3Q8 395 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 PCDHB11Q9Y5F2 797 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 SLCO1B1Q9Y6L6 691 aa13.8□□□□□ -0.2
COMMD4-205ENST00000562310 FAM221BA6H8Z2 402 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 PSMD12O00232 456 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 LSM1O15116 133 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 BCAT2O15382 392 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 PRAMEF4O60810 478 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 PEX11AO75192 247 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 PDYNP01213 254 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 T-ENOLP0DO92 83 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 THRAP10827 490 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 XRCC1P18887 633 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 CD22P20273 847 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 CXCR2P25025 360 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SERPINB1P30740 379 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ACADVLP49748 655 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ABATP80404 500 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 EMX2Q04743 252 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ACTN3Q08043 901 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 KIF19Q2TAC6 998 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 C6orf136Q5SQH8 315 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 PRAMEF9Q5VWM5 478 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 LYSMD4Q5XG99 296 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 IYDQ6PHW0 289 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SCIMPQ6UWF3 145 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SUSD1Q6UWL2 747 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 Q6ZSR9 355 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 GKN2Q86XP6 184 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 C1orf210Q8IVY1 113 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 FAM9CQ8IZT9 166 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 KRT78Q8N1N4 520 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 MIER2Q8N344 545 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SFRP1Q8N474 314 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 FNDC5Q8NAU1 212 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 RP9Q8TA86 221 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 LCN9Q8WX39 176 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 METTL2AQ96IZ6 378 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 MARK4Q96L34 752 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 TCEAL2Q9H3H9 227 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 LRTM1Q9HBL6 345 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 AIG1Q9NVV5 245 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ASIC5Q9NY37 505 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 NOP53Q9NZM5 478 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ZNF624Q9P2J8 865 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SPASTQ9UBP0 616 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 TAC3Q9UHF0 121 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 ADGRE2Q9UHX3 823 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 G3BP2Q9UN86 482 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 RRP15Q9Y3B9 282 aaKnown RBP13.79□□□□□ -0.2
COMMD4-205ENST00000562310 CCL27Q9Y4X3 112 aa13.79□□□□□ -0.2
COMMD4-205ENST00000562310 MUC3AQ02505 3323 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 A0A1W2PPV9 198 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 PIPSLA2A3N6 862 aa13.78□□□□□ -0.2
COMMD4-205ENST00000562310 EML2O95834 649 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms