RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 THOC1Q96FV9 657 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 SLC38A3Q99624 504 aa21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 HGH1Q9BTY7 390 aa21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 SHCBP1LQ9BZQ2 653 aa21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 ABCG4Q9H172 646 aa21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 TRIT1Q9H3H1 467 aaKnown RBP21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 LRRN3Q9H3W5 708 aa21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 SEMA4BQ9NPR2 832 aaPredicted RBP21.72■■□□□ 1.07
SYNGR3-202ENST00000562045 AKAP13Q12802 2813 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 IGHV1OR21-1A0A087WYE8 117 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 MED19A0JLT2 244 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 NTN3O00634 580 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 TSPAN8P19075 237 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 CD1CP29017 333 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 PIK3CGP48736 1102 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 GTF2H2Q13888 395 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 HES3Q5TGS1 186 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 GTF2H2CQ6P1K8 395 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 USP53Q70EK8 1073 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 LRRC70Q7Z2Q7 622 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 OR5AR1Q8NGP9 310 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 ZBTB26Q9HCK0 441 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 PNPOQ9NVS9 261 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 KCNK4Q9NYG8 393 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 STOX2Q9P2F5 926 aaPredicted RBP21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 ZDHHC2Q9UIJ5 367 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 STK38LQ9Y2H1 464 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 ANGPTL3Q9Y5C1 460 aa21.71■■□□□ 1.07
SYNGR3-202ENST00000562045 SLCO1B7G3V0H7 640 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 UBFD1O14562 309 aaKnown RBP21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 SLC16A8O95907 504 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 CSF2RBP32927 897 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 GDF5P43026 501 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 SLC6A12P48065 614 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 PDX1P52945 283 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 E2F1Q01094 437 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 SF3A3Q12874 501 aaKnown RBP eCLIP21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 SH2D4BQ5SQS7 431 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 CDCP2Q5VXM1 449 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 AGTRAPQ6RW13 159 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 GOLGA7Q7Z5G4 137 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 CACNA2D3Q8IZS8 1091 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 AFAP1L2Q8N4X5 818 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 TEX9Q8N6V9 391 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 CCDC197Q8NCU1 140 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 AGR3Q8TD06 166 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 SEC16BQ96JE7 1060 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 FERD3LQ96RJ6 166 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 NUDT22Q9BRQ3 303 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 DCTN4Q9UJW0 460 aa21.7■■□□□ 1.06
SYNGR3-202ENST00000562045 KRT87PA6NCN2 255 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 IMPA1P29218 277 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 GPR3P46089 330 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 PRKG2Q13237 762 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 RBBP7Q16576 425 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 PTCHD3Q3KNS1 767 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 ANKS4BQ8N8V4 417 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 STN1Q9H668 368 aaKnown RBP21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 MID1IP1Q9NPA3 183 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 TMEM9Q9P0T7 183 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 HEBP2Q9Y5Z4 205 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 KATNA1O75449 491 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 ADRB1P08588 477 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 EPB42P16452 691 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 SH3BP2P78314 561 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 KIF26BQ2KJY2 2108 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 ZXDCQ2QGD7 858 aaPredicted RBP21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 B3GNT8Q7Z7M8 397 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 RFWD2Q8NHY2 731 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 AGAP11Q8TF27 550 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 ZNF382Q96SR6 550 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 ATG10Q9H0Y0 220 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 MVB12BQ9H7P6 319 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 NOL11Q9H8H0 719 aaKnown RBP21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 CIDEBQ9UHD4 219 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 POLG2Q9UHN1 485 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 KLK13Q9UKR3 277 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 USH1CQ9Y6N9 552 aa21.69■■□□□ 1.06
SYNGR3-202ENST00000562045 NCOR2Q9Y618 2525 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 A0A0G2JND7 137 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 LILRA5A6NI73 299 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 PPP6CO00743 305 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 WDR47O94967 919 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 HOXB3P14651 431 aaPredicted RBP21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 TYRP1P17643 537 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 PKNOX1P55347 436 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 ZNF574Q6ZN55 896 aaPredicted RBP21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 ZNF480Q8WV37 535 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 RSC1A1Q92681 617 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 SH3KBP1Q96B97 665 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 FAR2Q96K12 515 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 GFM1Q96RP9 751 aaKnown RBP21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 KIR3DX1Q9H7L2 352 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 IPPKQ9H8X2 491 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 UCK1Q9HA47 277 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 VTI1BQ9UEU0 232 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 TDRKHQ9Y2W6 561 aaKnown RBP21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 ARL2BPQ9Y2Y0 163 aa21.68■■□□□ 1.06
SYNGR3-202ENST00000562045 MATN2O00339 956 aa21.67■■□□□ 1.06
SYNGR3-202ENST00000562045 ESRRBO95718 433 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms