RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZBED9Q6R2W3 1325 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 MED19A0JLT2 244 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 FAM170AA1A519 330 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 HNRNPCL2B2RXH8 293 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 F5H6K3 240 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 TMEM178BH3BS89 294 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 PLK4O00444 970 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 GPR137BO60478 399 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 WDR1O75083 606 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 CXCL10P02778 98 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 H1F0P07305 194 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 CA3P07451 260 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 IQCF3P0C7M6 154 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 FDPSP14324 419 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 SLC9A3P48764 834 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 ZNF41P51814 821 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 ART1P52961 327 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 CDH13P55290 713 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 DYNLL1P63167 89 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 KLRC3Q07444 240 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 CAMK2DQ13557 499 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 NFATC4Q14934 902 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SF3B4Q15427 424 aaKnown RBP eCLIP3.56□□□□□ -1.843e-8■■□□□ 11.8
HERC1-215ENST00000561436 KIF19Q2TAC6 998 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 HERC4Q5GLZ8 1057 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 KRBOX4Q5JUW0 171 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 C6orf163Q5TEZ5 329 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SNRNP48Q6IEG0 339 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 OR7E24Q6IFN5 339 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 UNQ6126/PRO20091Q6UXV3 157 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 DET1Q7L5Y6 550 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 CENPVQ7Z7K6 275 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 TLK2Q86UE8 772 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SPATA2LQ8IUW3 424 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 C1orf87Q8N0U7 546 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 OR52I2Q8NH67 350 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 MOSPD2Q8NHP6 518 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SMPDL3BQ92485 455 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 MRPS27Q92552 414 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 SECISBP2LQ93073 1101 aaKnown RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 SLAMF9Q96A28 289 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 OR6C1Q96RD1 312 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 GFI1Q99684 422 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SLC25A23Q9BV35 468 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 FNDC11Q9BVV2 318 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SPRY4Q9C004 299 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 WNT5BQ9H1J7 359 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 SEMA6AQ9H2E6 1030 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 C6orf106Q9H6K1 298 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 OPA3Q9H6K4 179 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 UBE2ZQ9H832 354 aaPredicted RBP3.56□□□□□ -1.84
HERC1-215ENST00000561436 EQTNQ9NQ60 294 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 TMEM30AQ9NV96 361 aa3.56□□□□□ -1.84
HERC1-215ENST00000561436 RANBP2P49792 3224 aaKnown RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 GRIN2DO15399 1336 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ZNF532Q9HCE3 1301 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 IGKV6D-41A0A0C4DH26 115 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 A0A1W2PP11 408 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 DENND3A2RUS2 1198 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 C5orf67F2Z3F1 127 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SLC28A2O43868 658 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 DIAPH2O60879 1101 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 HMMRO75330 724 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 MED24O75448 989 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 PDE9AO76083 593 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 GJB5O95377 273 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 HSPA4LO95757 839 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 NDUFB10O96000 172 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 LDLRP01130 860 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ZFYP08048 801 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 SCG2P13521 617 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 MYOD1P15172 320 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 DNASE1P24855 282 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 NOVP48745 357 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 PPP5CP53041 499 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 CCL23P55773 120 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 DSCR9P59020 149 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SLC20A2Q08357 652 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 PTPRCAPQ14761 206 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SHROOM1Q2M3G4 852 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 CCDC184Q52MB2 194 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 KLHL22Q53GT1 634 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 KLC3Q6P597 504 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 CTR9Q6PD62 1173 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 CXCL17Q6UXB2 119 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 PACS1Q6VY07 963 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ERN2Q76MJ5 926 aaKnown RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 ADCK2Q7Z695 626 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ADIPOR2Q86V24 386 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 TMPRSS12Q86WS5 348 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 ODF3L1Q8IXM7 274 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.55□□□□□ -1.84
HERC1-215ENST00000561436 MAML2Q8IZL2 1156 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 ZNF444Q8N0Y2 327 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 GBGT1Q8N5D6 347 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 RBMXL3Q8N7X1 1067 aaKnown RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 ZBTB8BQ8NAP8 495 aaPredicted RBP3.55□□□□□ -1.84
HERC1-215ENST00000561436 XXYLT1Q8NBI6 393 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 KIF18AQ8NI77 898 aa3.55□□□□□ -1.84
HERC1-215ENST00000561436 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms