RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PITPNM3Q9BZ71 974 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 CLSTN2Q9H4D0 955 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 FAM60AQ9NP50 221 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 CTSFQ9UBX1 484 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TEKT2Q9UIF3 430 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 GNPTGQ9UJJ9 305 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 FZD10Q9ULW2 581 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ASB1Q9Y576 335 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.05□□□□□ -1.6
HERC1-213ENST00000561359 COLEC10Q9Y6Z7 277 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 A0A1B0GX78 115 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 GTPBP10A4D1E9 387 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 ASPDHA6ND91 283 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 SLC22A31A6NKX4 558 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 H3BMH7 237 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 FOXN3O00409 490 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 BTN3A3O00478 584 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 BTN3A1O00481 513 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 RASGRF2O14827 1237 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 HCRTR1O43613 425 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 DNAJA2O60884 412 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 SMPD2O60906 423 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 KCNJ13O60928 360 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 POP7O75817 140 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 LSM8O95777 96 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 MT-CYBP00156 380 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 SLC4A1P02730 911 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 PNMA6AP0CW24 399 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 ITGAMP11215 1152 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 COX6A1P12074 109 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 ZNF16P17020 682 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 ZNF24P17028 368 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NDUFS1P28331 727 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 UQCRC1P31930 480 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 HTR7P34969 479 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 PTGER1P34995 402 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 SYKP43405 635 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 MMP13P45452 471 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 CARSP49589 748 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 ARSEP51690 589 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NUP107P57740 925 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 AP2B1P63010 937 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 RNF4P78317 190 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 EEF1A2Q05639 463 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 TMEM115Q12893 351 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 CAMK4Q16566 473 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 FLYWCH1Q4VC44 716 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 CATSPEREQ5SY80 951 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 MARC1Q5VT66 337 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 TIGD7Q6NT04 549 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 FAM83HQ6ZRV2 1179 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 GK5Q6ZS86 529 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NLRP9Q7RTR0 991 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 FGD2Q7Z6J4 655 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 YTHDF3Q7Z739 585 aaKnown RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 TRIM73Q86UV7 250 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 RPRMLQ8N4K4 120 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 TRAM1L1Q8N609 369 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NPWQ8N729 165 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 GPR26Q8NDV2 337 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 OR5M3Q8NGP4 307 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 FAM222BQ8WU58 562 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.04□□□□□ -1.6
HERC1-213ENST00000561359 ZNF653Q96CK0 615 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 SARGQ9BW04 601 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NUP85Q9BW27 656 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 HES7Q9BYE0 225 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 WWP1Q9H0M0 922 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 SLC26A1Q9H2B4 701 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 TP63Q9H3D4 680 aaPredicted RBP5.04□□□□□ -1.6
HERC1-213ENST00000561359 PLEKHF2Q9H8W4 249 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 NT5MQ9NPB1 228 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 APEX2Q9UBZ4 518 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 C3orf18Q9UK00 162 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 CBLCQ9ULV8 474 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 TTLL3Q9Y4R7 772 aa5.04□□□□□ -1.6
HERC1-213ENST00000561359 MPDZO75970 2070 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 DNAJC13O75165 2243 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 A0A1B0GTH9 108 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 A8MUI8 341 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 C2orf74A8MZ97 194 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 PSMA7O14818 248 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 RGS13O14921 159 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 CDC40O60508 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERC1-213ENST00000561359 SLC35G4P0C7Q5 338 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 KRT3P12035 628 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ERCC2P18074 760 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 SLC9A1P19634 815 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 GPD1P21695 349 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 UGT1A1P22309 533 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 CA4P22748 312 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 CMA1P23946 247 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 CXCR2P25025 360 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 PEX19P40855 299 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 OR1D4P47884 311 aa5.03□□□□□ -1.6
HERC1-213ENST00000561359 ZFP36L2P47974 494 aaKnown RBP5.03□□□□□ -1.6
HERC1-213ENST00000561359 ARSFP54793 590 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms