RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 COL12A1Q99715 3063 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 SPTBN1Q01082 2364 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 LOC105369274A0A096LPK9 316 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 LOC102723532A0A0G2JNH3 316 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR2A25A4D2G3 310 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 MASP2O00187 686 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 MED26O95402 600 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 SYF2O95926 243 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 UMODP07911 640 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 ERVK-10P10266 1014 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 CMPK1P30085 196 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 RPA3P35244 121 aaPredicted RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 PNLIPRP1P54315 467 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 MLLT10P55197 1068 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 GNG11P61952 73 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 FOXK1P85037 733 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 BBS9Q3SYG4 887 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 NADK2Q4G0N4 442 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 MED25Q71SY5 747 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 PIWIL4Q7Z3Z4 852 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 PPP1R32Q7Z5V6 425 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 KLHL7Q8IXQ5 586 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR4N4Q8N0Y3 316 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 SMPDL3AQ92484 453 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 FKBP10Q96AY3 582 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 AARSD1Q9BTE6 412 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 MLXIPLQ9NP71 852 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 ABCF3Q9NUQ8 709 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 SLC17A6Q9P2U8 582 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 CTSFQ9UBX1 484 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 TAC3Q9UHF0 121 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 PLAAQ9Y263 795 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 DHRS7Q9Y394 339 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 SPTAN1Q13813 2472 aaKnown RBP16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZGRF1Q86YA3 2104 aa16.46■□□□□ 0.23
CDC42BPB-208ENST00000561271 VPS26AO75436 327 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 SLC16A8O95907 504 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 EIF2S1P05198 315 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 MPC1LP0DKB6 136 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 ENO3P13929 434 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 OR1D4P47884 311 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 SSPNQ14714 243 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 ARHGAP19Q14CB8 494 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 WASHC2DQ5SRD0 308 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 HP1BP3Q5SSJ5 553 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 YOD1Q5VVQ6 348 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 PAPD7Q5XG87 772 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 IGDCC3Q8IVU1 814 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 C2CD4AQ8NCU7 369 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZNF480Q8WV37 535 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 INPP5DQ92835 1189 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 PDLIM2Q96JY6 352 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 PWWP2AQ96N64 755 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZFYVE21Q9BQ24 234 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 SYNPO2LQ9H987 977 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 MRPS30Q9NP92 439 aaKnown RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 P4HTMQ9NXG6 502 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 GPR83Q9NYM4 423 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 STOX2Q9P2F5 926 aaPredicted RBP16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 KLHL42Q9P2K6 505 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 PYCARDQ9ULZ3 195 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 COMMD10Q9Y6G5 202 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 MAU2Q9Y6X3 613 aa16.45■□□□□ 0.22
CDC42BPB-208ENST00000561271 IGKV1-8A0A0C4DH67 115 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 HYKKA2RU49 373 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 FITM1A5D6W6 292 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 SMAPO00193 183 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 CD63P08962 238 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 IVDP26440 423 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 NAA25Q14CX7 972 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 SPANXN3Q5MJ09 141 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 DCAF10Q5QP82 559 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 RBM20Q5T481 1227 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 ICE2Q659A1 982 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 SHISA6Q6ZSJ9 500 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 PCGF5Q86SE9 256 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 CREG2Q8IUH2 290 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 FBXO15Q8NCQ5 510 aaPredicted RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 ASB11Q8WXH4 323 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 PTERQ96BW5 349 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 CFAP36Q96G28 342 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 IP6K3Q96PC2 410 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 SPSB2Q99619 263 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 EBNA1BP2Q99848 306 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 ENAMQ9NRM1 1142 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 LUZP4Q9P127 313 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZC3H7BQ9UGR2 993 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 TRMT6Q9UJA5 497 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 G3BP2Q9UN86 482 aaKnown RBP16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 ZNF451Q9Y4E5 1061 aa16.44■□□□□ 0.22
CDC42BPB-208ENST00000561271 E7ENX8 843 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 PEX12O00623 359 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 SRPX2O60687 465 aaPredicted RBP16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 ALOX12BO75342 701 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 TTC4O95801 387 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 GABRB3P28472 473 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 IMPA1P29218 277 aa16.43■□□□□ 0.22
CDC42BPB-208ENST00000561271 TIAL1Q01085 375 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms