RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TAP2Q03519 686 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 RGS1Q08116 209 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 TGM3Q08188 693 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 C16orf72Q14CZ0 275 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 TGFBIQ15582 683 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 ZKSCAN8Q15776 578 aaPredicted RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 CCDC153Q494R4 210 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 MANEAQ5SRI9 462 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 CEP85LQ5SZL2 805 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 LCTLQ6UWM7 567 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 C6orf15Q6UXA7 325 aaPredicted RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 ZNF574Q6ZN55 896 aaPredicted RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 TIFABQ6ZNK6 161 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 TRIM73Q86UV7 250 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 THOC6Q86W42 341 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 SLC22A9Q8IVM8 553 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 MCATQ8IVS2 390 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 ESX1Q8N693 406 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 CAMKVQ8NCB2 501 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 TTLQ8NG68 377 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 OR2L3Q8NG85 312 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 DCAKDQ8WVC6 231 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 ZCCHC14Q8WYQ9 949 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 CCT6BQ92526 530 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 REPS1Q96D71 796 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 THAP11Q96EK4 314 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 MAGEB10Q96LZ2 347 aaPredicted RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 CTRCQ99895 268 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 MRPL46Q9H2W6 279 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 PLAC1Q9HBJ0 212 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 SPHK1Q9NYA1 384 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 ADAMTS6Q9UKP5 1117 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 PADI1Q9ULC6 663 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 PCDHGA7Q9Y5G6 932 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 OTOGLQ3ZCN5 2332 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 PI4KAP42356 2102 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ADAMTS9Q9P2N4 1935 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 A0A088AWK7 358 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 A0A0J9YVX5 310 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ANKDD1BA6NHY2 528 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 H7BY64 318 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 GOLGA8RI6L899 631 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 CPNE3O75131 537 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 TOP3BO95985 862 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 SLC35G6P0C7Q6 338 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ATXN8OSP0DMR3 200 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 MYL2P10916 166 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PYGBP11216 843 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 FGF3P11487 239 aaPredicted RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 CCL4P13236 92 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PVRP15151 417 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 EZRP15311 586 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 ST6GAL1P15907 406 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ITGAXP20702 1163 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ZNF10P21506 573 aaPredicted RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 IMPA1P29218 277 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 UCNP55089 124 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 NAA20P61599 178 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 TBPL1P62380 186 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 MC1RQ01726 317 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 IRF8Q02556 426 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 CDC16Q13042 620 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 GPS2Q13227 327 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PDK4Q16654 411 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PFKFB4Q16877 469 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PTCHD3Q3KNS1 767 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 TBC1D25Q3MII6 688 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 CCSMST1Q4G0I0 132 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.31□□□□□ -0.76
TPM1-229ENST00000561242 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 YOD1Q5VVQ6 348 aaPredicted RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 NIPAL1Q6NVV3 410 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 HDXQ7Z353 690 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 TDRPQ86YL5 185 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 NLGN4XQ8N0W4 816 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 D2HGDHQ8N465 521 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 NLGN4YQ8NFZ3 816 aaPredicted RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 AENQ8WTP8 325 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 ANKRD49Q8WVL7 239 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 SLC5A11Q8WWX8 675 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 NAF1Q96HR8 494 aaKnown RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 SLC41A2Q96JW4 573 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 FAR2Q96K12 515 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PRAP1Q96NZ9 151 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ZFYVE21Q9BQ24 234 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 DPH1Q9BZG8 443 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 ACTR5Q9H9F9 607 aaPredicted RBP10.31□□□□□ -0.76
TPM1-229ENST00000561242 KCNK9Q9NPC2 374 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 OCIAD1Q9NX40 245 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 GPRC5BQ9NZH0 403 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 SLC22A14Q9Y267 594 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 BTRCQ9Y297 605 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 STK38LQ9Y2H1 464 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 PADI2Q9Y2J8 665 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 FAM186AA6NE01 2351 aa10.31□□□□□ -0.76
TPM1-229ENST00000561242 KLK10O43240 276 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 OR1F1O43749 312 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 STK17BO94768 372 aa10.3□□□□□ -0.76
TPM1-229ENST00000561242 KIAA0754O94854 1291 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms