RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MANEALQ5VSG8 457 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 MLIPQ5VWP3 458 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 RSBN1Q5VWQ0 802 aaPredicted RBP8.34□□□□□ -1.07
CCDC33-209ENST00000560565 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 KDELC1Q6UW63 502 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 GDPGP1Q6ZNW5 385 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 FAM92BQ6ZTR7 304 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 TAS2R42Q7RTR8 314 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ADAMTSL2Q86TH1 951 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 UMODL1-AS1Q8N2C9 162 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 PSMA8Q8TAA3 256 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 BRSK1Q8TDC3 778 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 CHTF18Q8WVB6 975 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 FAR1Q8WVX9 515 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 SLC13A3Q8WWT9 602 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ISG20Q96AZ6 181 aaKnown RBP8.34□□□□□ -1.07
CCDC33-209ENST00000560565 MRGPRX2Q96LB1 330 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 CEP19Q96LK0 163 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ZNF300Q96RE9 604 aaPredicted RBP8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ATOH8Q96SQ7 321 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 C19orf43Q9BQ61 176 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 HOXD1Q9GZZ0 328 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ARMC7Q9H6L4 198 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 DYRK4Q9NR20 520 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 KIF17Q9P2E2 1029 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.34□□□□□ -1.07
CCDC33-209ENST00000560565 SFMBT1Q9UHJ3 866 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 ADGRE2Q9UHX3 823 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 GMPPBQ9Y5P6 360 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 F5P12259 2224 aa8.34□□□□□ -1.07
CCDC33-209ENST00000560565 IGLV3-10A0A075B6K4 115 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SLC12A8A0AV02 714 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 A8MVJ9 347 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ANHXE9PGG2 379 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 H3BMM5 538 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CXCR6O00574 342 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 STX7O15400 261 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 FAM20BO75063 409 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PMPCBO75439 489 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 NDUFS3O75489 264 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CCNKO75909 580 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 OLFM2O95897 454 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 F11P03951 625 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 LINC00032P0C843 101 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PRPS2P11908 318 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 EFNA1P20827 205 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PPIBP23284 216 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 DDX6P26196 483 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SHMT2P34897 504 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SLC11A2P49281 568 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 STC1P52823 247 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PLK1P53350 603 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 EPHA5P54756 1037 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 GP2P55259 537 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 YBEYP58557 167 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 GNG2P59768 71 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 IL2P60568 153 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SLC35A2P78381 396 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MRPS15P82914 257 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 EMX1Q04741 257 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF33BQ06732 778 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CYP4F3Q08477 520 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ABHD18Q0P651 414 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 EFEMP1Q12805 493 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 GRB7Q14451 532 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 STARD3Q14849 445 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CLCA4Q14CN2 919 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 IMPG1Q17R60 797 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ZIK1Q3SY52 487 aaPredicted RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PARP15Q460N3 678 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 C5orf22Q49AR2 442 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ARMCX4Q5H9R4 360 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 RABL3Q5HYI8 236 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PITRM1Q5JRX3 1037 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 RBM20Q5T481 1227 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 CCNJQ5T5M9 372 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 IER5LQ5T953 404 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 AGAP6Q5VW22 663 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 KIAA1614Q5VZ46 1190 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SPESP1Q6UW49 350 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MTSS1LQ765P7 747 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PAGE2Q7Z2X7 111 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 BMP8AQ7Z5Y6 402 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SNX20Q7Z614 316 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 LYSMD2Q8IV50 215 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MFSD6LQ8IWD5 586 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 SLC44A3Q8N4M1 653 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ASCC1Q8N9N2 400 aaKnown RBP8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF540Q8NDQ6 660 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 OR4L1Q8NH43 312 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ANGPTL6Q8NI99 470 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ZFP90Q8TF47 636 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 ING5Q8WYH8 240 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 FIG4Q92562 907 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 TTC9Q92623 222 aa8.33□□□□□ -1.08
CCDC33-209ENST00000560565 MRPS31Q92665 395 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms