RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TAB3Q8N5C8 712 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 CLEC1AQ8NC01 280 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 FBXO36Q8NEA4 188 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 DENND1AQ8TEH3 1009 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 DLG3Q92796 817 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 PEX13Q92968 403 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 GBP5Q96PP8 586 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 OR2A14Q96R47 310 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 CYTH2Q99418 400 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 KLHL25Q9H0H3 589 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 ETNK1Q9HBU6 452 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 ACTL7BQ9Y614 415 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 PCSK5Q92824 1860 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 PRRC2CQ9Y520 2896 aaKnown RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 CCDC88CQ9P219 2028 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 PEX12O00623 359 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 KLF7O75840 302 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 TPH1P17752 444 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 PKLRP30613 574 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 OTX2P32243 289 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 RAB28P51157 221 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 DCDP81605 110 aaKnown RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 LGSNQ5TDP6 509 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 TRIM73Q86UV7 250 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 RBMXL3Q8N7X1 1067 aaKnown RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 DNAAF3Q8N9W5 541 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 Q8NA96 180 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 OR2Y1Q8NGV0 311 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 FLVCR1-AS1Q8TAF5 88 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 SSC4DQ8WTU2 575 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 SLC22A18Q96BI1 424 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 PWWP2AQ96N64 755 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 RANBP9Q96S59 729 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 FAM60AQ9NP50 221 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 NKIRAS1Q9NYS0 192 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 IFT80Q9P2H3 777 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 PLCL2Q9UPR0 1127 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 CHMP2BQ9UQN3 213 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 TDRKHQ9Y2W6 561 aaKnown RBP13.06□□□□□ -0.32
SMAD3-214ENST00000560402 PRSS21Q9Y6M0 314 aa13.06□□□□□ -0.32
SMAD3-214ENST00000560402 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 CCDC162PA2VCL2 907 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 SUN1O94901 812 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 FKBP9O95302 570 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 DDAH2O95865 285 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 CBSLP0DN79 551 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 CBSP35520 551 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 MSH2P43246 934 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 ACVR1Q04771 509 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 MYBPC3Q14896 1274 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 TMED2Q15363 201 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 ZIC1Q15915 447 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 AARS2Q5JTZ9 985 aaKnown RBP13.05□□□□□ -0.32
SMAD3-214ENST00000560402 DCAF10Q5QP82 559 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 FAM69BQ5VUD6 431 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 C3orf62Q6ZUJ4 267 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 NLRP9Q7RTR0 991 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 DCUN1D3Q8IWE4 304 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 SLC22A15Q8IZD6 547 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 OR13J1Q8NGT2 312 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 FKBP10Q96AY3 582 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 NRTNQ99748 197 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 NDC1Q9BTX1 674 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 ACSS3Q9H6R3 686 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 INTS7Q9NVH2 962 aaKnown RBP13.05□□□□□ -0.32
SMAD3-214ENST00000560402 IRAK4Q9NWZ3 460 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 SPHK1Q9NYA1 384 aa13.05□□□□□ -0.32
SMAD3-214ENST00000560402 ZC3H7BQ9UGR2 993 aaKnown RBP13.05□□□□□ -0.32
SMAD3-214ENST00000560402 PTRH2Q9Y3E5 179 aaKnown RBP13.05□□□□□ -0.32
SMAD3-214ENST00000560402 IQANK1A0A1B0GTG1 560 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 A6NL46 340 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 ISM1B1AKI9 464 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 POC1B-GALNT4F8VUJ3 575 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 S1PR4O95977 384 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 GOT2P00505 430 aaKnown RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 INHBAP08476 426 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 KRT15P19012 456 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 PEBP1P30086 187 aaKnown RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 ELK3P41970 407 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 ARSFP54793 590 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 SOX8P57073 446 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 DMTNQ08495 405 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 NKAIN1Q4KMZ8 207 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 YOD1Q5VVQ6 348 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 MLIPQ5VWP3 458 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
SMAD3-214ENST00000560402 IGFL3Q6UXB1 125 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 UNC5DQ6UXZ4 953 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 GALNT16Q8N428 558 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 DNAJC22Q8N4W6 341 aa13.04□□□□□ -0.32
SMAD3-214ENST00000560402 DYDC1Q8WWB3 177 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms