RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 IMMP1LQ96LU5 166 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 SPATA13Q96N96 652 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 GOLPH3Q9H4A6 298 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 RIC8BQ9NVN3 520 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 STMN3Q9NZ72 180 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 PCDHGB6Q9Y5F9 930 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 MYBL2P10244 700 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 FBLP22087 321 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 CXCR2P25025 360 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 EFNA3P52797 238 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 HADHBP55084 474 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 MUM1Q2TAK8 710 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 PRTGQ2VWP7 1150 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 FAAH2Q6GMR7 532 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 FBXO42Q6P3S6 717 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 TMEM205Q6UW68 189 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 UNC5DQ6UXZ4 953 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 RNF44Q7L0R7 432 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 CCDC50Q8IVM0 306 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 GPR137Q96N19 417 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 PPP1R2P1Q96PQ5 205 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 FERMT1Q9BQL6 677 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 TGIF2Q9GZN2 237 aa18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.78■□□□□ 0.6
RABGGTA-214ENST00000560163 SPG11Q96JI7 2443 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 A0A0J9YVX5 310 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 RPN2P04844 631 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 ICAM2P13598 275 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 SLC26A3P40879 764 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 EMP3P54852 163 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 CSNK1G2P78368 415 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 HSPA14Q0VDF9 509 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 DSG2Q14126 1118 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 POU6F1Q14863 301 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 KRTCAP3Q53RY4 240 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 ABHD17BQ5VST6 288 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 NCCRP1Q6ZVX7 275 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 CFAP61Q8NHU2 1237 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 CHTF18Q8WVB6 975 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 GPAMQ9HCL2 828 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 IFNKQ9P0W0 207 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 INTUQ9ULD6 942 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 NEU2Q9Y3R4 380 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 FAM169AQ9Y6X4 670 aa18.77■□□□□ 0.6
RABGGTA-214ENST00000560163 CCDC162PA2VCL2 907 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 FFAR3O14843 346 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 GPR42O15529 346 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 SLCO2B1O94956 709 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 RBP3P10745 1247 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 CD1EP15812 388 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 HOXB4P17483 251 aaPredicted RBP18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 PSMB5P28074 263 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 ZNF766Q5HY98 468 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 AMER3Q8N944 861 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 OR2L3Q8NG85 312 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 OR2A1Q8NGT9 310 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 HMGCLL1Q8TB92 370 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 ASZ1Q8WWH4 475 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 KRT35Q92764 455 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 TRPC4Q9UBN4 977 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 SLC39A10Q9ULF5 831 aa18.76■□□□□ 0.59
RABGGTA-214ENST00000560163 ANKHD1Q8IWZ3 2542 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 A0A1W2PPV9 198 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 EIF2S1P05198 315 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 EIF3EP60228 445 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 AP2B1P63010 937 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 YBX1P67809 324 aaKnown RBP18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 SKOR2Q2VWA4 1001 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 H3F3CQ6NXT2 135 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 NEK10Q6ZWH5 1172 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 LKAAEAR1Q8TD35 194 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 MVB12AQ96EY5 273 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 MAGED4Q96JG8 741 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 MIPEPQ99797 713 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 CARD6Q9BX69 1037 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 RAB11FIP5Q9BXF6 653 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 SYNPO2LQ9H987 977 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 C14orf105Q9NVL8 296 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 CDC14AQ9UNH5 594 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 EFR3BQ9Y2G0 817 aa18.75■□□□□ 0.59
RABGGTA-214ENST00000560163 GTF3C1Q12789 2109 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 OR2A25A4D2G3 310 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 ASPDHA6ND91 283 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 ADAM10O14672 748 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 STK10O94804 968 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 HEXBP07686 556 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 UQCRHP07919 91 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 COPS2P61201 443 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 ZNF33BQ06732 778 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 LONRF1Q17RB8 773 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 DARS2Q6PI48 645 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 CHERPQ8IWX8 916 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 ARHGEF39Q8N4T4 335 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 MDS2Q8NDY4 140 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 OR13J1Q8NGT2 312 aa18.74■□□□□ 0.59
RABGGTA-214ENST00000560163 PHF10Q8WUB8 498 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms