RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 EIF4HQ15056 248 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 SMAD1Q15797 465 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 KCTD21Q4G0X4 260 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 FNDC3BQ53EP0 1204 aaKnown RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CARD16Q5EG05 197 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ARMC12Q5T9G4 340 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CGB2Q6NT52 195 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PPP4R4Q6NUP7 873 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CYS1Q717R9 158 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 Q7L0L9 218 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 LRRC6Q86X45 466 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 TDRPQ86YL5 185 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CAMK1DQ8IU85 385 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CLVS1Q8IUQ0 354 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 UNC5BQ8IZJ1 945 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 TRIML2Q8N7C3 387 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PPM1NQ8N819 430 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 BLOC1S5Q8TDH9 187 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 MFSD3Q96ES6 412 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CERS2Q96G23 380 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PLEKHA8Q96JA3 519 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ZNF641Q96N77 438 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 RANBP9Q96S59 729 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PAFAH2Q99487 392 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CDX2Q99626 313 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CIB1Q99828 191 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PITPNM3Q9BZ71 974 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 BRD9Q9H8M2 597 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 C12orf4Q9NQ89 552 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ELOVL2Q9NXB9 296 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PSMC3IPQ9P2W1 217 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 HECAQ9UBI9 543 aaPredicted RBP6.87□□□□□ -1.31
ZEB1-216ENST00000559496 TBK1Q9UHD2 729 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 LGALS13Q9UHV8 139 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ACAD8Q9UKU7 415 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PLA2G4CQ9UP65 541 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 CFL2Q9Y281 166 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 PCDHA9Q9Y5H5 950 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 ATP23Q9Y6H3 246 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 KIAA1549LQ6ZVL6 1849 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 LAMA3Q16787 3333 aa6.87□□□□□ -1.31
ZEB1-216ENST00000559496 TRANK1O15050 2925 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 C15orf38-AP3S2A0A0A6YYH1 394 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ZCWPW2A0A1B0GU75 182 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 A0A1W2PQ67 120 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 FAM172BPA6NC97 362 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 TBC1D3BA6NDS4 549 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 FAM90A27PA6NNH2 459 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 CXorf49A8MYA2 514 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 C2CD4DB7Z1M9 353 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 PRRT4C9JH25 899 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 HTRA2O43464 458 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 SCO2O43819 266 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 TMCC2O75069 709 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 SPAG7O75391 227 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 PAPSS2O95340 614 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 POP4O95707 220 aaKnown RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 SLC4A1P02730 911 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 C1QAP02745 245 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 AMY2AP04746 511 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 APODP05090 189 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 S100A6P06703 90 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 PIRTP0C851 137 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ERVK-10P10266 1014 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 FOSL2P15408 326 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ZNF20P17024 532 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 AMY2BP19961 511 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ADSLP30566 484 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 GKP32189 559 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 OPRD1P41143 372 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ENTPD1P49961 510 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 BLVRAP53004 296 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 IST1P53990 364 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 SLC18A1P54219 525 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 GNG2P59768 71 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 FOLH1Q04609 750 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 NAB1Q13506 487 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 GRM3Q14832 879 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 AAK1Q2M2I8 961 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 MMEL1Q495T6 779 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 C6orf10Q5SRN2 563 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 TSTD2Q5T7W7 516 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 PDPK2PQ6A1A2 396 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 KIAA0930Q6ICG6 404 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ZNF449Q6P9G9 518 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 DPY19L3Q6ZPD9 716 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 IDO2Q6ZQW0 420 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 USP43Q70EL4 1123 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 GLT6D1Q7Z4J2 308 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ARPINQ7Z6K5 226 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 KCNMB4Q86W47 210 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 SLC26A11Q86WA9 606 aa6.86□□□□□ -1.31
ZEB1-216ENST00000559496 ANKRD53Q8N9V6 530 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms