RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IL11RAQ14626 422 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 POU6F1Q14863 301 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 CCDC38Q502W7 563 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 PRAMEF17Q5VTA0 474 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 METRNLQ641Q3 311 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 RANBP10Q6VN20 620 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 REC114Q7Z4M0 266 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 TMTC1Q8IUR5 882 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 RBM12BQ8IXT5 1001 aaKnown RBP7.12□□□□□ -1.27
SPG11-213ENST00000558988 KBTBD2Q8IY47 623 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 NXPE1Q8N323 547 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 UBL4BQ8N7F7 174 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 LCN9Q8WX39 176 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 UBXN4Q92575 508 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 MR1Q95460 341 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 ALS2CR12Q96Q35 445 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 PANX2Q96RD6 677 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 FERD3LQ96RJ6 166 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 COPS8Q99627 209 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 TMEM121Q9BTD3 319 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 SPRY4Q9C004 299 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 SLC7A5P2Q9GIP4 190 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 MEGF9Q9H1U4 602 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 EPN3Q9H201 632 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 ADNPQ9H2P0 1102 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 ACTL8Q9H568 366 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 XKR8Q9H6D3 395 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 SLC24A2Q9UI40 661 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 AMFRQ9UKV5 643 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 PADI1Q9ULC6 663 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 TP53TG5Q9Y2B4 290 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 R3HDM2Q9Y2K5 976 aaKnown RBP7.12□□□□□ -1.27
SPG11-213ENST00000558988 SPTA1P02549 2419 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 TCRBV7S2A1N4TA0A589 114 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 TLCD2A6NGC4 264 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 OR51F1A6NGY5 319 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SLC9B1P1A6NJY1 282 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 TMEM150CB9EJG8 249 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 MKRN2OSH3BPM6 223 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 K7EM74 188 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 IFRD1O00458 451 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 TOX3O15405 576 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 ARHGAP6O43182 974 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 KCNJ13O60928 360 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SCRG1O75711 98 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 DNAJB5O75953 348 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 IFNB1P01574 187 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 FGF5P12034 268 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ATP1B2P14415 290 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 PVRP15151 417 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ADRA1AP35348 466 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 LMAN1P49257 510 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 CSRP3P50461 194 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 KPNA2P52292 529 aaKnown RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 VAV2P52735 878 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ZNF140P52738 457 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 CSE1LP55060 971 aaKnown RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 HSD11B2P80365 405 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 XIAPP98170 497 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 PDE1BQ01064 536 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ACY1Q03154 408 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 DMPKQ09013 629 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 MPP2Q14168 576 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 IGFBP7Q16270 282 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 LACTB2Q53H82 288 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 TMTC4Q5T4D3 741 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 FAM69BQ5VUD6 431 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 CYB5D1Q6P9G0 228 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 NAPRTQ6XQN6 538 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SNX20Q7Z614 316 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 TRIM73Q86UV7 250 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 GLCCI1Q86VQ1 547 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 HOOK3Q86VS8 718 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 LDLRAD3Q86YD5 345 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 CLDN19Q8N6F1 224 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 OR2L2Q8NH16 312 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ATG4AQ8WYN0 398 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 KLHL6Q8WZ60 621 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ULK4Q96C45 1275 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SLC41A2Q96JW4 573 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ZNF514Q96K75 400 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 BAG1Q99933 345 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 SRMSQ9H3Y6 488 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 KIR3DX1Q9H7L2 352 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 AKIRIN1Q9H9L7 192 aaPredicted RBP7.11□□□□□ -1.27
SPG11-213ENST00000558988 LHX9Q9NQ69 397 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SMOXQ9NWM0 555 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 SMARCAL1Q9NZC9 954 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 EPHA6Q9UF33 1036 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 ACSL5Q9ULC5 683 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 POLHQ9Y253 713 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 MAN2B2Q9Y2E5 1009 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 COLEC10Q9Y6Z7 277 aa7.11□□□□□ -1.27
SPG11-213ENST00000558988 HELZ2Q9BYK8 2649 aaKnown RBP7.1□□□□□ -1.27
SPG11-213ENST00000558988 ARGFXA6NJG6 315 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 E7EVH7 732 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 BTN3A1O00481 513 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 LDB2O43679 373 aa7.1□□□□□ -1.27
SPG11-213ENST00000558988 SGTAO43765 313 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms