RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SMPDL3AQ92484 453 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 FAM167BQ9BTA0 163 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 SOX17Q9H6I2 414 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 PLAC1Q9HBJ0 212 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CUTCQ9NTM9 273 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 SPATA7Q9P0W8 599 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 TRMT6Q9UJA5 497 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 ADAMTS6Q9UKP5 1117 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 SETXQ7Z333 2677 aaKnown RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 MDC1Q14676 2089 aaKnown RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 MYO1CO00159 1063 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 SMAPO00193 183 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 VPS26AO75436 327 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PIAS1O75925 651 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 SLC16A8O95907 504 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 RECKO95980 971 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 AHSGP02765 367 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 SAT1P21673 171 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 ATP5DP30049 168 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PAFAH1B1P43034 410 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 SPANXN3Q5MJ09 141 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 THEMIS2Q5TEJ8 643 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 TCTN3Q6NUS6 607 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PAQR3Q6TCH7 311 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 RAB43Q86YS6 212 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 APLFQ8IW19 511 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 GPATCH11Q8N954 259 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 TTC29Q8NA56 475 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 C2CD4AQ8NCU7 369 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 ZNF480Q8WV37 535 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 ASB11Q8WXH4 323 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 DLG3Q92796 817 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 ZUFSPQ96AP4 578 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 MESP1Q9BRJ9 268 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 WDR83Q9BRX9 315 aaKnown RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 YIPF2Q9BWQ6 316 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 CHRNA10Q9GZZ6 450 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 DPH5Q9H2P9 285 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 FAM114A2Q9NRY5 505 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 CUEDC1Q9NWM3 386 aaPredicted RBP11.98□□□□□ -0.49
SMAD3-208ENST00000558827 SRPK3Q9UPE1 567 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PLAAQ9Y263 795 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 PADI2Q9Y2J8 665 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
SMAD3-208ENST00000558827 IGKV1-8A0A0C4DH67 115 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 HYKKA2RU49 373 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 EFCAB8A8MWE9 144 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 TARM1B6A8C7 271 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 H0YGG7 62 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 DSCR3O14972 297 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 ZBTB14O43829 449 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 UMODP07911 640 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 MPC1LP0DKB6 136 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 CASRP41180 1078 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 RPL21P46778 160 aaKnown RBP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 PGDP52209 483 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 ARF3P61204 181 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 C2orf54Q08AI8 447 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 KLRB1Q12918 225 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 GRM7Q14831 915 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 FASTKD3Q14CZ7 662 aaKnown RBP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 TEDDM1Q5T9Z0 273 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 HIBCHQ6NVY1 386 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 COX15Q7KZN9 410 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 PPP1R32Q7Z5V6 425 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 MRGPREQ86SM8 312 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 PDIK1LQ8N165 341 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 HMGCLL1Q8TB92 370 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 PROKR1Q8TCW9 393 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 SEC14L1Q92503 715 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 KCNJ9Q92806 393 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 COL26A1Q96A83 441 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 LINGO1Q96FE5 620 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 CERS2Q96G23 380 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 MACROD1Q9BQ69 325 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 DPH2Q9BQC3 489 aaPredicted RBP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 NUDT9Q9BW91 350 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 ATG10Q9H0Y0 220 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 CLMPQ9H6B4 373 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 CTSFQ9UBX1 484 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMAD3-208ENST00000558827 CNTRLQ7Z7A1 2325 aa11.97□□□□□ -0.49
SMAD3-208ENST00000558827 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 A0A1B0GX78 115 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 OR2A25A4D2G3 310 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 E7ENX8 843 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 H7BY64 318 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 GFYI3L273 518 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PEX12O00623 359 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 HAT1O14929 419 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 GCGRP47871 477 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 ARSFP54793 590 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 SNRPNP63162 240 aaKnown RBP11.96□□□□□ -0.49
SMAD3-208ENST00000558827 TAP2Q03519 686 aa11.96□□□□□ -0.49
SMAD3-208ENST00000558827 PDIA2Q13087 525 aaKnown RBP11.96□□□□□ -0.49
SMAD3-208ENST00000558827 SSPNQ14714 243 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms