RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 RENBPP51606 427 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TERF1P54274 439 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 GEMIN4P57678 1058 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 IFI35P80217 286 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 CTBP1Q13363 440 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SNX1Q13596 522 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 RFTN1Q14699 578 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 SIX1Q15475 284 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 SPA17Q15506 151 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ARMC12Q5T9G4 340 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LRRC38Q5VT99 294 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LRRC66Q68CR7 880 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SP5Q6BEB4 398 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 DOK6Q6PKX4 331 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 KDELC1Q6UW63 502 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 BBS12Q6ZW61 710 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 MARK2Q7KZI7 788 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 PID1Q7Z2X4 250 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 KATNAL2Q8IYT4 538 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 C17orf53Q8N3J3 647 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 SLC15A4Q8N697 577 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 GPR26Q8NDV2 337 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LPCAT1Q8NF37 534 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 EXD1Q8NHP7 514 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CCDC110Q8TBZ0 833 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 C1orf54Q8WWF1 131 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ATG4AQ8WYN0 398 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 HDAC11Q96DB2 347 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 IMP4Q96G21 291 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 PDXPQ96GD0 296 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 APIPQ96GX9 242 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 MS4A14Q96JA4 679 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CCDC114Q96M63 670 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ZNF599Q96NL3 588 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LRRC61Q9BV99 259 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SARGQ9BW04 601 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TDRD1Q9BXT4 1180 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 OSBPL8Q9BZF1 889 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 FAM96AQ9H5X1 160 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ATP13A3Q9H7F0 1226 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SMURF2Q9HAU4 748 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 PCDH9Q9HC56 1237 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 FGF22Q9HCT0 170 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 LZTFL1Q9NQ48 299 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 GDF3Q9NR23 364 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SACM1LQ9NTJ5 587 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TMEM51Q9NW97 253 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 RCOR3Q9P2K3 495 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 XPR1Q9UBH6 696 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SLC23A2Q9UGH3 650 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 TESQ9UGI8 421 aaKnown RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 MOSPD1Q9UJG1 213 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 ING1Q9UK53 422 aaPredicted RBP4.19□□□□□ -1.74
SPG11-211ENST00000558561 DMTF1Q9Y222 760 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 SPTBP11277 2137 aa4.19□□□□□ -1.74
SPG11-211ENST00000558561 CACNA1BQ00975 2339 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ACACBO00763 2458 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 WDFY3Q8IZQ1 3526 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CXorf51AA0A1B0GTR3 108 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 LOC285095A0A1B0GVY8 99 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 BTNL10A8MVZ5 291 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TMEM233B4DJY2 109 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 E7ENX8 843 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 F5H697 171 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 H7C0C1 242 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 GAPDHSO14556 408 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 PPM1DO15297 605 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 B4GAT1O43505 415 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TNFSF14O43557 240 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 FRS3O43559 492 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CER1O95813 267 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC4A1P02730 911 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 FGF1P05230 155 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 F7P08709 466 aaPredicted RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 ELFN1P0C7U0 828 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ZNF883P0CG24 379 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 BRAFP15056 766 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 KRT4P19013 534 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PSMB4P28070 264 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SERPINA4P29622 427 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CTNNA1P35221 906 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 RABIFP47224 123 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ATP5OP48047 213 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ACADVLP49748 655 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CCT8P50990 548 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 ZNF134P52741 427 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 STC1P52823 247 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 EIF3EP60228 445 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 SRP54P61011 504 aaKnown RBP4.18□□□□□ -1.74
SPG11-211ENST00000558561 AP1S1P61966 158 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CCL7P80098 99 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TAP2Q03519 686 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 CFHR1Q03591 330 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 KLF10Q13118 480 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC13A2Q13183 592 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SLC14A1Q13336 389 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 PDK1Q15118 436 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 TFDP3Q5H9I0 405 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 C3orf38Q5JPI3 329 aa4.18□□□□□ -1.74
SPG11-211ENST00000558561 SIRPB2Q5JXA9 342 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms