RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PKP2Q99959 881 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 PIGQQ9BRB3 760 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 MTMR12Q9C0I1 747 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 NYXQ9GZU5 481 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 THAP2Q9H0W7 228 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 CHMP4BQ9H444 224 aaKnown RBP2.89□□□□□ -1.95
SPG11-206ENST00000558093 NOL11Q9H8H0 719 aaKnown RBP2.89□□□□□ -1.95
SPG11-206ENST00000558093 CNOT10Q9H9A5 744 aaKnown RBP2.89□□□□□ -1.95
SPG11-206ENST00000558093 MYNNQ9NPC7 610 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 PIH1D3Q9NQM4 214 aaKnown RBP2.89□□□□□ -1.95
SPG11-206ENST00000558093 PRMT7Q9NVM4 692 aaPredicted RBP2.89□□□□□ -1.95
SPG11-206ENST00000558093 NUDT4Q9NZJ9 180 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 ASIC3Q9UHC3 531 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 RNF150Q9ULK6 438 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 TRPV2Q9Y5S1 764 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 FAM169AQ9Y6X4 670 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 R4GN57 208 aa2.89□□□□□ -1.95
SPG11-206ENST00000558093 EDDM13A0A1B0GTR0 161 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 FPGTO14772 594 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 ERAL1O75616 437 aaKnown RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 CYP2A7P20853 494 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 PRKACGP22612 351 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 COPB2P35606 906 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 HNF4AP41235 474 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 CSE1LP55060 971 aaKnown RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 LMO4P61968 165 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 HNRNPKP61978 463 aaKnown RBP eCLIP2.88□□□□□ -1.95
SPG11-206ENST00000558093 VEZF1Q14119 521 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 ZNF74Q16587 644 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 TAF1BQ53T94 588 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 UGT3A1Q6NUS8 523 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 SLC25A47Q6Q0C1 308 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 CENPVQ7Z7K6 275 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 RYBPQ8N488 228 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 TC2NQ8N9U0 490 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 OR1L3Q8NH93 324 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 SLCO2A1Q92959 643 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 ARSGQ96EG1 525 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 C4orf45Q96LM5 186 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 C10orf90Q96M02 699 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 ZNF300Q96RE9 604 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 DCTN5Q9BTE1 182 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 LRRC61Q9BV99 259 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 WWTR1Q9GZV5 400 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 ZMYND12Q9H0C1 365 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 OLAHQ9NV23 265 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 PANK4Q9NVE7 773 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 TP53BP1Q12888 1972 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 COL2A1P02458 1487 aaPredicted RBP2.88□□□□□ -1.95
SPG11-206ENST00000558093 RPGRIP1LQ68CZ1 1315 aa2.88□□□□□ -1.95
SPG11-206ENST00000558093 A0A1W2PR80 420 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 TCRBV21S2A2A0A5A6 115 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 TRBC2A0A5B9 178 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 TRIM77I1YAP6 450 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 K7ENM7 598 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 C22orf31O95567 290 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ACSL3O95573 720 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 IGHEP01854 428 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ZSCAN5DPP0CG00 497 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ACADSP16219 412 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 RPL35AP18077 110 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 EEF1B2P24534 225 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 PTGER4P35408 488 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 CAPZA2P47755 286 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 DNA2P51530 1060 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ALDH3A2P51648 485 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 CCR3P51677 355 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 MYL7Q01449 175 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 CALD1Q05682 793 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 RALGDSQ12967 914 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 RAPSNQ13702 412 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 SNTB1Q13884 538 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 FASTKD3Q14CZ7 662 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 NOTUMQ6P988 496 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 PAQR6Q6TCH4 344 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 Q6ZRP5 223 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ZBTB49Q6ZSB9 765 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ENOSF1Q7L5Y1 443 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 PCGF5Q86SE9 256 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 IQCHQ86VS3 1027 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 KLHDC1Q8N7A1 406 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 POGLUT1Q8NBL1 392 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 SLC4A11Q8NBS3 891 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 OR10Q1Q8NGQ4 319 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 GATAD1Q8WUU5 269 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 FAM71F1Q96KD3 344 aaPredicted RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 LPAR4Q99677 370 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 GPATCH1Q9BRR8 931 aaKnown RBP2.87□□□□□ -1.95
SPG11-206ENST00000558093 THEGQ9P2T0 379 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 MORF4L1Q9UBU8 362 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 ANAPC2Q9UJX6 822 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 CHKBQ9Y259 395 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 WDR83OSQ9Y284 106 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 CSNK1G3Q9Y6M4 447 aa2.87□□□□□ -1.95
SPG11-206ENST00000558093 A0A1W2PPQ1 181 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 O00370 1275 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 IDH3BO43837 385 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 RPS6KA5O75582 802 aa2.86□□□□□ -1.95
SPG11-206ENST00000558093 HSP90AA1P07900 732 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms