RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PRMT9Q6P2P2 845 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 IGFL2Q6UWQ7 119 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 RNF44Q7L0R7 432 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 CUZD1Q86UP6 607 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 METTL27Q8N6F8 245 aaPredicted RBP15.18■□□□□ 0.02
TUBB3-213ENST00000557262 OR9A1PQ8NGU1 263 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 BARD1Q99728 777 aaKnown RBP15.18■□□□□ 0.02
TUBB3-213ENST00000557262 WDR77Q9BQA1 342 aaPredicted RBP15.18■□□□□ 0.02
TUBB3-213ENST00000557262 DPH7Q9BTV6 452 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 LZTFL1Q9NQ48 299 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 CTSFQ9UBX1 484 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
TUBB3-213ENST00000557262 OR2A25A4D2G3 310 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ANKUB1A6NFN9 424 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 WIPF3A6NGB9 483 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ALOX12BO75342 701 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 MED26O95402 600 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 EIF2S1P05198 315 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 CCDC175P0C221 793 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 RNF224P0DH78 156 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 OGNP20774 298 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 CARSP49589 748 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 YBX1P67809 324 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ELOAQ14241 798 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 HIF1AQ16665 826 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 KIAA0930Q6ICG6 404 aaPredicted RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 DTWD1Q8N5C7 304 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 OR11G2Q8NGC1 345 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 DNAJB14Q8TBM8 379 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 STT3BQ8TCJ2 826 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 PPP4R1Q8TF05 950 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 COG1Q8WTW3 980 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 SMPDL3AQ92484 453 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 FAM136AQ96C01 138 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 MIEF2Q96C03 454 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ZFYVE21Q9BQ24 234 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ACAT2Q9BWD1 397 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 LHPPQ9H008 270 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 AGPAT4Q9NRZ5 378 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 GALPQ9UBC7 116 aa15.17■□□□□ 0.02
TUBB3-213ENST00000557262 ZNF282Q9UDV7 671 aaPredicted RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 TSR3Q9UJK0 312 aaKnown RBP15.17■□□□□ 0.02
TUBB3-213ENST00000557262 HIVEP3Q5T1R4 2406 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 MAGEB16A2A368 324 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 E5RI56 91 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 NRP2O60462 931 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 AVILO75366 819 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 PSIP1O75475 530 aaKnown RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 ZGLP1P0C6A0 271 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 ERGP11308 486 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 PAMP19021 973 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 HSD17B2P37059 387 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 EMP3P54852 163 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 KLC1Q07866 573 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 KCNJ11Q14654 390 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 ARHGAP19Q14CB8 494 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 TRIP13Q15645 432 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 KLHL38Q2WGJ6 581 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 ACSBG2Q5FVE4 666 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 CENPUQ71F23 418 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 PRELID2Q8N945 189 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 TRIM58Q8NG06 486 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 THOC3Q96J01 351 aaKnown RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 PLCD4Q9BRC7 762 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 CRB3Q9BUF7 120 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 MRPS30Q9NP92 439 aaKnown RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 STOX2Q9P2F5 926 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 ERRFI1Q9UJM3 462 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-213ENST00000557262 CDC14AQ9UNH5 594 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 SLC5A6Q9Y289 635 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 VPS9D1Q9Y2B5 631 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 NTNG1Q9Y2I2 539 aa15.16■□□□□ 0.02
TUBB3-213ENST00000557262 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 ARHGEF33A8MVX0 844 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 H0YGG7 62 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 PHF2O75151 1096 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 ERVK-10P10266 1014 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 CXCR5P32302 372 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 RPA3P35244 121 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 MAGEA6P43360 314 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 TERF1P54274 439 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 ARF3P61204 181 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 Q0VFX4 171 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 GPS1Q13098 491 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 KCTD19Q17RG1 926 aaPredicted RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 PRTGQ2VWP7 1150 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.15■□□□□ 0.02
TUBB3-213ENST00000557262 ATG9BQ674R7 924 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 CASC4Q6P4E1 433 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 SUSD1Q6UWL2 747 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 NEK10Q6ZWH5 1172 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 CILP2Q8IUL8 1156 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 LMF1Q96S06 567 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 PKP4Q99569 1192 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 EPS8L2Q9H6S3 715 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
TUBB3-213ENST00000557262 INTS10Q9NVR2 710 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms