RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ODC1P11926 461 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 FCGR1AP12314 374 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 GJA1P17302 382 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 FCARP24071 287 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 CDC25CP30307 473 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 HOXA6P31267 233 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 BFSP1Q12934 665 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 GPR17Q13304 367 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 ITPRIPL2Q3MIP1 535 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 ALKAL1Q6UXT8 129 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 CACNA2D4Q7Z3S7 1137 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 ARID3BQ8IVW6 561 aaPredicted RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 CD302Q8IX05 232 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 THEM5Q8N1Q8 247 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 SPATA6LQ8N4H0 392 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 TMEM116Q8NCL8 245 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 LMO3Q8TAP4 145 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 SMARCE1Q969G3 411 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 C18orf25Q96B23 403 aaPredicted RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 MMABQ96EY8 250 aaPredicted RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 SLC41A2Q96JW4 573 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 PPP1R13BQ96KQ4 1090 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 FAM110AQ9BQ89 295 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 LLPHQ9BRT6 129 aaKnown RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 PPP1R3EQ9H7J1 279 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 RPF1Q9H9Y2 349 aaKnown RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 POLD4Q9HCU8 107 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 HINT3Q9NQE9 182 aaKnown RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 LARSQ9P2J5 1176 aaKnown RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 SLCO3A1Q9UIG8 710 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 TINAGQ9UJW2 476 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 ICAM5Q9UMF0 924 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 UBQLN1Q9UMX0 589 aaKnown RBP4.98□□□□□ -1.61
HIF1A-209ENST00000556827 KIF3AQ9Y496 699 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 YIPF1Q9Y548 306 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 KCNE2Q9Y6J6 123 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 C5orf42Q9H799 3197 aa4.98□□□□□ -1.61
HIF1A-209ENST00000556827 MYBPHLA2RUH7 354 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 SLC16A4O15374 487 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 FTCDO95954 541 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 HOXB5P09067 269 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ZNF806P0C7X5 589 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 TDGF1P13385 188 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 FDPSP14324 419 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CD58P19256 250 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 TYMPP19971 482 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CYP3A5P20815 502 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 GABRR2P28476 465 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 STX2P32856 288 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 RDXP35241 583 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CCR2P41597 374 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 LIG4P49917 911 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 LIMK1P53667 647 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 F2RL1P55085 397 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 BRWD1-AS2P59051 145 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 HMGN5P82970 282 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 FCHO2Q0JRZ9 810 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 SMARCB1Q12824 385 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 TRAF2Q12933 501 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 FOXD4Q12950 439 aaPredicted RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 KARSQ15046 597 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 PON2Q15165 354 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CCNG2Q16589 344 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 DPCR1Q3MIW9 517 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 XKR4Q5GH76 650 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 EFHC1Q5JVL4 640 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 TTI2Q6NXR4 508 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 WDR73Q6P4I2 378 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 SLC36A4Q6YBV0 504 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CREB3L2Q70SY1 520 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 DNAJB7Q7Z6W7 309 aaPredicted RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 PXKQ7Z7A4 578 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CUZD1Q86UP6 607 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 DSELQ8IZU8 1212 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ANKRD52Q8NB46 1076 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ZNF114Q8NC26 417 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 PSMG2Q969U7 264 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ZMAT2Q96NC0 199 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 PGLYRP2Q96PD5 576 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 SEPT5Q99719 369 aaPredicted RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 CXCL16Q9H2A7 254 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ARRDC1-AS1Q9H2J1 176 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 FBRSL1Q9HCM7 1045 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 LIMA1Q9UHB6 759 aaKnown RBP4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ERVK-11Q9UQG0 969 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 ADAM18Q9Y3Q7 739 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 PCDHGA5Q9Y5G8 931 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 LOXHD1Q8IVV2 1947 aa4.97□□□□□ -1.61
HIF1A-209ENST00000556827 TRIOO75962 3097 aa4.96□□□□□ -1.61
HIF1A-209ENST00000556827 CPED1A4D0V7 1026 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 E9PMD0 336 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 VCYO14598 125 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 PLRG1O43660 514 aaKnown RBP4.96□□□□□ -1.62
HIF1A-209ENST00000556827 JAK2O60674 1132 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 AKAP3O75969 853 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 CLDN14O95500 239 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 PPP1R3DO95685 299 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 MLYCDO95822 493 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 OR4Q2P0C623 313 aa4.96□□□□□ -1.62
HIF1A-209ENST00000556827 CXCL8P10145 99 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms