RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NPLOC4Q8TAT6 608 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 FAM83DQ9H4H8 585 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 TVP23BQ9NYZ1 205 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 CFAP97Q9P2B7 532 aa14.65□□□□□ -0.06
ARHGEF40-207ENST00000556399 GUCY1B2O75343 617 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 ITIH1P19827 911 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 BTG3Q14201 252 aaPredicted RBP14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 KCTD11Q693B1 232 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 PSAPL1Q6NUJ1 521 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 RETREG3Q86VR2 466 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 NCSTNQ92542 709 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 PAAF1Q9BRP4 392 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 C1QTNF1Q9BXJ1 281 aa14.65□□□□□ -0.07
ARHGEF40-207ENST00000556399 GLI3P10071 1580 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 A0A0U1RQF3 1178 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 PTGESO14684 152 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 GTF2E2P29084 291 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 HTR6P50406 440 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 ANKRD26P1Q6NSI1 321 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 PLEKHG7Q6ZR37 379 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 C16orf62Q7Z3J2 963 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 FRS2Q8WU20 508 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 TMEM40Q8WWA1 233 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLC38A4Q969I6 547 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLC22A4Q9H015 551 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 KRBA1A5PL33 1030 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 TPD52L2O43399 206 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 CCNYL3P0C7X3 344 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 MYL9P24844 172 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 DPP6P42658 865 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 CCL14Q16627 93 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 CRTC2Q53ET0 693 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 C2orf73Q8N5S3 287 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR10T2Q8NGX3 314 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 ISL2Q96A47 359 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 MALT1Q9UDY8 824 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 A0A096LPI6 279 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 M0QX08 132 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 KDELR3O43731 214 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 PCDH7O60245 1069 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 DHFRP00374 187 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 ELFN1P0C7U0 828 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 CSKP41240 450 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF45Q02386 682 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLC13A2Q13183 592 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 APOFQ13790 326 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 VN1R5Q7Z5H4 357 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 SPARTQ8N0X7 666 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 COL26A1Q96A83 441 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLC30A2Q9BRI3 323 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 MCMBPQ9BTE3 642 aa14.64□□□□□ -0.07
ARHGEF40-207ENST00000556399 AP3D1O14617 1153 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 NME6O75414 186 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 GABRR2P28476 465 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 HNMTP50135 292 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 DGKEP52429 567 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 RCAN2Q14206 197 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 PRSS55Q6UWB4 352 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 OR13J1Q8NGT2 312 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ANKRA2Q9H9E1 313 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF232Q9UNY5 417 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 RPL36Q9Y3U8 105 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAGED1Q9Y5V3 778 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MITFO75030 526 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 CLDN7O95471 211 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 PRG2P13727 222 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 RPL17P18621 184 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 AGXTP21549 392 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ERVPABLB-1P60509 514 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 RPP38P78345 283 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 KCNA10Q16322 511 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MPPE1Q53F39 396 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ADGRF1Q5T601 910 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 KDELC1Q6UW63 502 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZBED3Q96IU2 234 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MYOCQ99972 504 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 COMMD3Q9UBI1 195 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ISPDA4D126 451 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 BCKDHAP12694 445 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 DCKP27707 260 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 SEMA3AQ14563 771 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 PTCHD3Q3KNS1 767 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 NHSL2Q5HYW2 709 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 HDDC2Q7Z4H3 204 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 HS3ST5Q8IZT8 346 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 C1orf52Q8N6N3 182 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 CMTM7Q96FZ5 175 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 SLC35A5Q9BS91 424 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZDHHC3Q9NYG2 299 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF195O14628 629 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 TPST2O60704 377 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 CD72P21854 359 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 MAGEA12P43365 314 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ALDH3B2P48448 385 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 CLCN4P51793 760 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ARPC4P59998 168 aa14.63□□□□□ -0.07
ARHGEF40-207ENST00000556399 ZNF181Q2M3W8 571 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms