RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ARGFXA6NJG6 315 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PFKMP08237 780 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM163BP0C2L3 166 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RPS2P15880 293 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RFC3P40938 356 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 VSX2P58304 361 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MZT2BQ6NZ67 158 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 METTL2BQ6P1Q9 378 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF571Q7Z3V5 609 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GLCCI1Q86VQ1 547 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ANKK1Q8NFD2 765 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR5B17Q8NGF7 314 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 BSNDQ8WZ55 320 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 KIAA1143Q96AT1 154 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SRMSQ9H3Y6 488 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CNTNAP5Q8WYK1 1306 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LRRC7Q96NW7 1537 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM90A27PA6NNH2 459 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 WWP2O00308 870 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SOCS2O14508 198 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 XKRYO14609 159 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NME6O75414 186 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RFPL2O75678 378 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 EPCAMP16422 314 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PAX3P23760 479 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TBXAS1P24557 533 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 VIPR1P32241 457 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MMP13P45452 471 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CD151P48509 253 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ALDH5A1P51649 535 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TAP1Q03518 808 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GRK1Q15835 563 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 DPYSL2Q16555 572 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM98BQ52LJ0 330 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 DUS1LQ6P1R4 473 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MYCBPAPQ8TBZ2 947 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MBOAT7Q96N66 472 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C7orf50Q9BRJ6 194 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ROPN1BQ9BZX4 212 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AMBRA1Q9C0C7 1298 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CST11Q9H112 138 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C11orf49Q9H6J7 331 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ROPN1Q9HAT0 212 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NMUR1Q9HB89 426 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ACTL7AQ9Y615 435 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 EEF1E1-BLOC1S5C9J1V9 151 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 EEF1E1O43324 174 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MAPKAPK3Q16644 382 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM135BQ49AJ0 1406 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZDHHC16Q969W1 377 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PYCR2Q96C36 320 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM209Q96SK2 561 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FGFBP2Q9BYJ0 223 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OCEL1Q9H607 264 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 POLMQ9NP87 494 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 DEC1Q9P2X7 70 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MID1O15344 667 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 THRBP10828 461 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GRM5P41594 1212 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NR1D2Q14995 579 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LAPTM4AQ15012 233 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 QPRTQ15274 297 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TTMPQ5BVD1 217 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SH3RF1Q7Z6J0 888 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 KYQ8NBH2 561 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MAGEB18Q96M61 343 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM20AQ96MK3 541 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OSBPL11Q9BXB4 747 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM117AQ9C073 453 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PIK3C2GO75747 1445 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MFSD11O43934 449 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 LILRB3O75022 631 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CYP11A1P05108 521 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CSF2RAP15509 400 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NPBWR1P48145 328 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ASCL1P50553 236 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MANFP55145 182 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 Q1RN00 199 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 RTL4Q6ZR62 310 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TRAPPC11Q7Z392 1133 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 HORMAD2Q8N7B1 307 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 FAM156AQ8NDB6 213 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 MYO19Q96H55 970 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMBIM4Q9HC24 238 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 WRAP73Q9P2S5 460 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CNOT11Q9UKZ1 510 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CNTNAP1P78357 1384 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF821O75541 412 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 IDSP22304 550 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 CCR3P51677 355 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GNA13Q14344 377 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 C18orf21Q32NC0 220 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 EARS2Q5JPH6 523 aaKnown RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 AGAP9Q5VTM2 703 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 PRMT9Q6P2P2 845 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 TMPRSS11FQ6ZWK6 438 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 OR5M1Q8NGP8 315 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 GPR150Q8NGU9 434 aa3.23□□□□□ -1.89
SYNE2-212ENST00000554584 SPRYD4Q8WW59 207 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-212ENST00000554584 NLGN3Q9NZ94 848 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms