RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HDAC10Q969S8 669 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TMEM125Q96AQ2 219 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TAMM41Q96BW9 452 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 ARHGEF26Q96DR7 871 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 PLEKHA8Q96JA3 519 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 DNAJC1Q96KC8 554 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TEKT5Q96M29 485 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 SEC22CQ9BRL7 303 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TEKT3Q9BXF9 490 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TLR10Q9BXR5 811 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 ASPSCR1Q9BZE9 553 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 SLC22A4Q9H015 551 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 RBM38Q9H0Z9 239 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 C1orf21Q9H246 121 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 IL25Q9H293 177 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 NARFLQ9H6Q4 476 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 PPANQ9NQ55 473 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 PLSCR4Q9NRQ2 329 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 C19orf12Q9NSK7 152 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 SLC38A7Q9NVC3 462 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 VPS54Q9P1Q0 977 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 TXNDC16Q9P2K2 825 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 NKX1-2Q9UD57 310 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 RSL24D1Q9UHA3 163 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 MUTYHQ9UIF7 546 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 VPS28Q9UK41 221 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 POU2F3Q9UKI9 436 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 AGO1Q9UL18 857 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 CDH9Q9ULB4 789 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 MRPS7Q9Y2R9 242 aaKnown RBP4.32□□□□□ -1.72
ATXN3-227ENST00000554491 ARL2BPQ9Y2Y0 163 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 RIPK3Q9Y572 518 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF292O60281 2723 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 DMDP11532 3685 aa4.32□□□□□ -1.72
ATXN3-227ENST00000554491 RALGAPA2Q2PPJ7 1873 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 ATP8B3O60423 1300 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CLUHO75153 1309 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 UMODL1Q5DID0 1318 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 A0A1W2PQ72 361 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 A0A1W2PRG6 482 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CCDC160A6NGH7 325 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 DDTLA6NHG4 134 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 LRRC53A6NM62 1247 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 M0R296 226 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 KIAA0391O15091 583 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RRP8O43159 456 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 GPR39O43194 453 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 TEX33O43247 280 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SYNCRIPO60506 623 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 TLR5O60602 858 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MAGEC1O60732 1142 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 NDUFS6O75380 124 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CNMDO75829 334 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RAB3DO95716 219 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 PGK1P00558 417 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 FGBP02675 491 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 FGF4P08620 206 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RALAP11233 206 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 OSMP13725 252 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 FDPSP14324 419 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 DARSP14868 501 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 HLA-DPA1P20036 260 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 DDCP20711 480 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 ALDH4A1P30038 563 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 OXTRP30559 389 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SERPINB1P30740 379 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SLC6A4P31645 630 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CYP2C18P33260 490 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 PCGF2P35227 344 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 EIF2S3P41091 472 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 NBL1P41271 181 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SLC1A4P43007 532 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RFX5P48382 616 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RASSF2P50749 326 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CDK9P50750 372 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 CDH4P55283 916 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 EIF3EP60228 445 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 GLO1Q04760 184 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF33AQ06730 810 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SELENBP1Q13228 472 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 DYRK1AQ13627 763 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 FLOT2Q14254 428 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 OXA1LQ15070 435 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 PTPRRQ15256 657 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MEA1Q16626 185 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RUNDC3AQ59EK9 446 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 EARS2Q5JPH6 523 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MARCH8Q5T0T0 291 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RARS2Q5T160 578 aaKnown RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MPP7Q5T2T1 576 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 ARHGEF16Q5VV41 709 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 RNF219Q5W0B1 726 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-227ENST00000554491 KRT79Q5XKE5 535 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SLC9A4Q6AI14 798 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SUSD1Q6UWL2 747 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 MSANTD1Q6ZTZ1 278 aa4.31□□□□□ -1.72
ATXN3-227ENST00000554491 GPRIN3Q6ZVF9 776 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms