RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 EML2O95834 649 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 LTA4HP09960 611 aaKnown RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 H2AFXP16104 143 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 AMD1P17707 334 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 F8A1P23610 371 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 MC1RQ01726 317 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ZNF844Q08AG5 666 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 PRKG2Q13237 762 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ESPL1Q14674 2120 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ZKSCAN8Q15776 578 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 CRTC2Q53ET0 693 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 TCTN3Q6NUS6 607 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 CEACAM20Q6UY09 585 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 VRK3Q8IV63 474 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 CCDC63Q8NA47 563 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ACVR1CQ8NER5 493 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 OR5AR1Q8NGP9 310 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 OR10G6Q8NH81 332 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 OR5K2Q8NHB8 316 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 MCOLN3Q8TDD5 553 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 LCN9Q8WX39 176 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 RAD51AP1Q96B01 352 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 SMC6Q96SB8 1091 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 DHRS4Q9BTZ2 278 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 FBXO8Q9NRD0 319 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 LNPEPQ9UIQ6 1025 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 RNF112Q9ULX5 631 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 SHANK1Q9Y566 2161 aa11.01□□□□□ -0.65
TMEM116-218ENST00000552839 USP9XQ93008 2570 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-218ENST00000552839 ENO4A6NNW6 628 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SUPT3HB4E1H0 165 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 GOLGA8RI6L899 631 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 COPEO14579 308 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SLC16A5O15375 505 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SUPT3HO75486 399 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 DLGAP3O95886 979 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 ALDOAP04075 364 aaKnown RBP11□□□□□ -0.65
TMEM116-218ENST00000552839 C2P06681 752 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 FURINP09958 794 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SLC35E2BP0CK96 405 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 PYGBP11216 843 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 BRAFP15056 766 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 XRCC1P18887 633 aaPredicted RBP11□□□□□ -0.65
TMEM116-218ENST00000552839 GNLYP22749 145 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 GCAP28676 217 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SLC26A3P40879 764 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 STAT5AP42229 794 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 FASLGP48023 281 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 GLRBP48167 497 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 PGGT1BP53609 377 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 GPS2Q13227 327 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 FHL5Q5TD97 284 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 CAPRIN2Q6IMN6 1127 aaKnown RBP11□□□□□ -0.65
TMEM116-218ENST00000552839 TMEM26Q6ZUK4 368 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 OOSP2Q86WS3 158 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SPATA6LQ8N4H0 392 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 PHC3Q8NDX5 983 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 ACMSDQ8TDX5 336 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 KCTD4Q8WVF5 259 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 ZPBPQ9BS86 351 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 MCMBPQ9BTE3 642 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 DERL2Q9GZP9 239 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 SRMSQ9H3Y6 488 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 ABCF3Q9NUQ8 709 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 UTP6Q9NYH9 597 aaKnown RBP11□□□□□ -0.65
TMEM116-218ENST00000552839 SENP1Q9P0U3 644 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11□□□□□ -0.65
TMEM116-218ENST00000552839 CIDEBQ9UHD4 219 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 MED16Q9Y2X0 877 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 NFS1Q9Y697 457 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 MED13Q9UHV7 2174 aa11□□□□□ -0.65
TMEM116-218ENST00000552839 GSAPA4D1B5 854 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 A6NCN8 305 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SYCE1LA8MT33 242 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SMIM24O75264 130 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 GLRA3O75311 464 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 VPS4BO75351 444 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 GUCA1CO95843 209 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ENO2P09104 434 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 RNF224P0DH78 156 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 TFEBP19484 476 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SHMT2P34897 504 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SLC19A1P41440 591 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 CCT5P48643 541 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 UBE2IP63279 158 aaKnown RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 IRF9Q00978 393 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 GPR18Q14330 331 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 GBX1Q14549 363 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 RASA2Q15283 850 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 HSP90B2PQ58FF3 399 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 THEMIS2Q5TEJ8 643 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 WDR74Q6RFH5 385 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-218ENST00000552839 ASB18Q6ZVZ8 466 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 TAX1BP1Q86VP1 789 aa10.99□□□□□ -0.65
TMEM116-218ENST00000552839 SYTL1Q8IYJ3 562 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms