RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 PPP3CCP48454 512 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 PITPNBP48739 271 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 SULT1E1P49888 294 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 SMSP52788 366 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 SRP54P61011 504 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ROR2Q01974 943 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 LTBQ06643 244 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 TROAPQ12815 778 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 HNF4GQ14541 408 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 TAF1BQ53T94 588 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 PPP6R3Q5H9R7 873 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ZNF324BQ6AW86 544 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 PRSS55Q6UWB4 352 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 DLEU7Q6UYE1 221 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 WDR88Q6ZMY6 472 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 C15orf52Q6ZUT6 534 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 TMPRSS11FQ6ZWK6 438 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ARMCX2Q7L311 632 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ATG9AQ7Z3C6 839 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 TAF8Q7Z7C8 310 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 RBM23Q86U06 439 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 AMZ2Q86W34 360 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 UNC5CLQ8IV45 518 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 GPT2Q8TD30 523 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 THRSPQ92748 146 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 SLCO4A1Q96BD0 722 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ORAI1Q96D31 301 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 FAM213AQ9BRX8 229 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ERP44Q9BS26 406 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 DDX47Q9H0S4 455 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 RAB17Q9H0T7 212 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 RPF1Q9H9Y2 349 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 HHATLQ9HCP6 504 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 KCNMB3Q9NPA1 279 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 CD93Q9NPY3 652 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 ATAD3AQ9NVI7 634 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 COX16Q9P0S2 106 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 HBS1LQ9Y450 684 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 CNTNAP2Q9UHC6 1331 aa4.37□□□□□ -1.71
RAB3IP-214ENST00000550847 PRR23D1E9PI22 279 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 H0YIG0 161 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 PLK4O00444 970 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 HS3ST1O14792 307 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ANKRD28O15084 1053 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 LDB2O43679 373 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 PRAF2O60831 178 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 TSC22D2O75157 780 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 IGHV2-70P01814 119 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 PRR23D2P0DMB1 279 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 MYL6BP14649 208 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 HNRNPH1P31943 449 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 PDLIM4P50479 330 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 GALK2Q01415 458 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CRYZQ08257 329 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 SPP2Q13103 211 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CHIT1Q13231 466 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CTU2Q2VPK5 515 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ZNF284Q2VY69 593 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 LACTB2Q53H82 288 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 FNBP1LQ5T0N5 605 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CCDC183Q5T5S1 534 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CENPPQ6IPU0 288 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 DUS1LQ6P1R4 473 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 KCTD18Q6PI47 426 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 BTNL8Q6UX41 500 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 B3GLCTQ6Y288 498 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 B3GNT6Q6ZMB0 384 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 MACC1Q6ZN28 852 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 CCDC73Q6ZRK6 1079 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 SHFQ7M4L6 423 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ZNF367Q7RTV3 350 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ADHFE1Q8IWW8 467 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 DSELQ8IZU8 1212 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 IQCF1Q8N6M8 205 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 PCDH20Q8N6Y1 951 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 VANGL1Q8TAA9 524 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 SLC35F5Q8WV83 523 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 FIG4Q92562 907 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 SYN2Q92777 582 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 STAMBPL1Q96FJ0 436 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ZNF582Q96NG8 517 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 LMF2Q9BU23 707 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 ACPTQ9BZG2 426 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 TFB2MQ9H5Q4 396 aaKnown RBP4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 Q9N2K0 584 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 OSER1Q9NX31 292 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 TMOD3Q9NYL9 352 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 NUDCQ9Y266 331 aa4.36□□□□□ -1.71
RAB3IP-214ENST00000550847 TRIP12Q14669 1992 aaPredicted RBP4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 PRSS51A0A1B0GVH4 220 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 A0A1W2PPK0 400 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 DENND3A2RUS2 1198 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 OR2M5A3KFT3 312 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 DVL1O14640 695 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 DDNO94850 711 aaPredicted RBP4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 UGT1A6P19224 532 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 FUT1P19526 365 aa4.35□□□□□ -1.71
RAB3IP-214ENST00000550847 PIK3R1P27986 724 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms