RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 CRTAMO95727 393 aa10□□□□□ -0.81
VPS29-208ENST00000550267 AP2A1O95782 977 aa10□□□□□ -0.81
VPS29-208ENST00000550267 WDPCPO95876 746 aa10□□□□□ -0.81
VPS29-208ENST00000550267 ZGLP1P0C6A0 271 aa10□□□□□ -0.81
VPS29-208ENST00000550267 COX6A1P12074 109 aa10□□□□□ -0.81
VPS29-208ENST00000550267 ADRA1AP35348 466 aa10□□□□□ -0.81
VPS29-208ENST00000550267 ARHGAP25P42331 645 aa10□□□□□ -0.81
VPS29-208ENST00000550267 NSG1P42857 185 aa10□□□□□ -0.81
VPS29-208ENST00000550267 CARSP49589 748 aaKnown RBP10□□□□□ -0.81
VPS29-208ENST00000550267 ZBED6P86452 979 aa10□□□□□ -0.81
VPS29-208ENST00000550267 MSLNQ13421 630 aaPredicted RBP10□□□□□ -0.81
VPS29-208ENST00000550267 YOD1Q5VVQ6 348 aaPredicted RBP10□□□□□ -0.81
VPS29-208ENST00000550267 ATG9BQ674R7 924 aa10□□□□□ -0.81
VPS29-208ENST00000550267 RANBP10Q6VN20 620 aa10□□□□□ -0.81
VPS29-208ENST00000550267 NLRP9Q7RTR0 991 aa10□□□□□ -0.81
VPS29-208ENST00000550267 C2orf73Q8N5S3 287 aaPredicted RBP10□□□□□ -0.81
VPS29-208ENST00000550267 AMER2Q8N7J2 671 aa10□□□□□ -0.81
VPS29-208ENST00000550267 TTC29Q8NA56 475 aaPredicted RBP10□□□□□ -0.81
VPS29-208ENST00000550267 LINC01555Q8NAE3 123 aa10□□□□□ -0.81
VPS29-208ENST00000550267 OR5K2Q8NHB8 316 aa10□□□□□ -0.81
VPS29-208ENST00000550267 ELMO1Q92556 727 aa10□□□□□ -0.81
VPS29-208ENST00000550267 MIEF2Q96C03 454 aa10□□□□□ -0.81
VPS29-208ENST00000550267 HAUS1Q96CS2 278 aa10□□□□□ -0.81
VPS29-208ENST00000550267 VAT1Q99536 393 aa10□□□□□ -0.81
VPS29-208ENST00000550267 GBA3Q9H227 469 aa10□□□□□ -0.81
VPS29-208ENST00000550267 C10orf88Q9H8K7 445 aa10□□□□□ -0.81
VPS29-208ENST00000550267 MCCC2Q9HCC0 563 aa10□□□□□ -0.81
VPS29-208ENST00000550267 ZNF304Q9HCX3 659 aa10□□□□□ -0.81
VPS29-208ENST00000550267 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10□□□□□ -0.81
VPS29-208ENST00000550267 CIDEBQ9UHD4 219 aa10□□□□□ -0.81
VPS29-208ENST00000550267 C3orf18Q9UK00 162 aa10□□□□□ -0.81
VPS29-208ENST00000550267 MRPS2Q9Y399 296 aaKnown RBP10□□□□□ -0.81
VPS29-208ENST00000550267 HYOU1Q9Y4L1 999 aa10□□□□□ -0.81
VPS29-208ENST00000550267 PRSS21Q9Y6M0 314 aa10□□□□□ -0.81
VPS29-208ENST00000550267 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
VPS29-208ENST00000550267 TRBV5-4A0A0C4DH59 114 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 SMTNL1A8MU46 457 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 LIN7AO14910 233 aaPredicted RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 PRAMEF2O60811 474 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 ANXA9O76027 345 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 BMP10O95393 424 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 SERPINC1P01008 464 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 SERPINA7P05543 415 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 GSTM1P09488 218 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 CD1EP15812 388 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 FDXRP22570 491 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 PKLRP30613 574 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 CDKN2BP42772 138 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 VSX2P58304 361 aaPredicted RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 GSTM4Q03013 218 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 OCA2Q04671 838 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 EEF1A2Q05639 463 aaKnown RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 TFDP2Q14188 446 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 GPR33Q49SQ1 333 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 TFDP3Q5H9I0 405 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 ZC3H12BQ5HYM0 836 aaKnown RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 TCTE1Q5JU00 501 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 HIBCHQ6NVY1 386 aaPredicted RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 CNSTQ6PJW8 725 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 FIGLAQ6QHK4 219 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 NDUFAF7Q7L592 441 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 TAS2R42Q7RTR8 314 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 TAX1BP1Q86VP1 789 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 ZGRF1Q86YA3 2104 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 SUN3Q8TAQ9 357 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 SLC35G2Q8TBE7 412 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 MAGED4Q96JG8 741 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 DNAJC1Q96KC8 554 aaKnown RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 QKIQ96PU8 341 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■■■ 30.1
VPS29-208ENST00000550267 SELENOSQ9BQE4 189 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 DDX56Q9NY93 547 aaKnown RBP9.99□□□□□ -0.81
VPS29-208ENST00000550267 SMARCAL1Q9NZC9 954 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 IL1RAPL1Q9NZN1 696 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 TRHDEQ9UKU6 1024 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 DOCK10Q96BY6 2186 aa9.99□□□□□ -0.81
VPS29-208ENST00000550267 IGHV1-45A0A0A0MS14 117 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 SLC5A10A0PJK1 596 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 FITM1A5D6W6 292 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 OR5H15A6NDH6 313 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 AP2A2O94973 939 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 TMEM253P0C7T8 217 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 ITGAMP11215 1152 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 RBL1P28749 1068 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 RAB28P51157 221 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 ART1P52961 327 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 CSNK1G2P78368 415 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 TAZQ16635 292 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 SYTL3Q4VX76 610 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 WASHC2DQ5SRD0 308 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 LRRC38Q5VT99 294 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 MEX3BQ6ZN04 569 aaKnown RBP9.98□□□□□ -0.81
VPS29-208ENST00000550267 BTLAQ7Z6A9 289 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 PIANPQ8IYJ0 282 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 MMP21Q8N119 569 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 P3H4Q92791 437 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 IL17FQ96PD4 163 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 KRTAP4-12Q9BQ66 201 aa9.98□□□□□ -0.81
VPS29-208ENST00000550267 BPIFA3Q9BQP9 254 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms